STRINGSTRING
Six1 Six1 Eya1 Eya1 Rdh10 Rdh10 Satb2 Satb2 Twist2 Twist2 Prrx1 Prrx1 Tgfb2 Tgfb2 Flvcr1 Flvcr1 Mthfd1l Mthfd1l Nodal Nodal Slc39a3 Slc39a3 Chst11 Chst11 Alx1 Alx1 Myf5 Myf5 Wnt9a Wnt9a Lhx1 Lhx1 Nog Nog Hoxb9 Hoxb9 Hoxb8 Hoxb8 Hoxb7 Hoxb7 Hoxb6 Hoxb6 Hoxb5 Hoxb5 Hoxb4 Hoxb4 Hoxb3 Hoxb3 Hoxb2 Hoxb2 Hoxb1 Hoxb1 Pcgf2 Pcgf2 Wnt9b Wnt9b Eif4a3 Eif4a3 Asxl2 Asxl2 Osr1 Osr1 Mycn Mycn Sox11 Sox11 Med12 Med12 Ctnnb1 Ctnnb1 Tgfbr2 Tgfbr2 Setd2 Setd2 Hyal1 Hyal1 Smad3 Smad3 Dscaml1 Dscaml1 Foxc2 Foxc2 Irx5 Irx5 Fgfr2 Fgfr2 Fuz Fuz Megf8 Megf8 Tulp3 Tulp3 Hoxa11 Hoxa11 Hoxa9 Hoxa9 Twist1 Twist1 Hoxa7 Hoxa7 Hoxa5 Hoxa5 Hoxa4 Hoxa4 Hoxa3 Hoxa3 Hoxa2 Hoxa2 Hoxa1 Hoxa1 Pdgfra Pdgfra Wdr19 Wdr19 Hspg2 Hspg2 Tgfbr1 Tgfbr1 Pax5 Pax5 Mmp16 Mmp16 Col11a1 Col11a1 Alx3 Alx3 Tbx15 Tbx15 Slc39a1 Slc39a1 Shox2 Shox2 Gnas Gnas Bmp7 Bmp7 Alx4 Alx4 Hoxd4 Hoxd4 Hoxd3 Hoxd3 Hoxd9 Hoxd9 Hoxd10 Hoxd10 Hoxd11 Hoxd11 Dlx2 Dlx2 Prrx2 Prrx2 Bmi1 Bmi1 Fgf8 Fgf8 Men1 Men1 Smad2 Smad2 Ndst1 Ndst1 Zeb1 Zeb1 Six2 Six2 Mdfi Mdfi Runx2 Runx2 Ift140 Ift140 Dlg1 Dlg1 Tbx1 Tbx1 Hoxc4 Hoxc4 Hoxc9 Hoxc9 Hoxc11 Hoxc11 Col2a1 Col2a1 Grhl2 Grhl2 Osr2 Osr2 Nipbl Nipbl Mmp14 Mmp14 Bmp4 Bmp4 Mef2c Mef2c Tfap2a Tfap2a Gli3 Gli3 Wdr60 Wdr60 Gsc Gsc Tgfb3 Tgfb3 Six4 Six4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Six1Homeobox protein SIX1. (284 aa)
Eya1Eyes absent homolog 1 isoform X1. (591 aa)
Rdh10Retinol dehydrogenase 10. (341 aa)
Satb2DNA-binding protein SATB2 isoform X1. (733 aa)
Twist2Twist-related protein 2. (160 aa)
Prrx1Paired mesoderm homeobox protein 1 isoform X1. (245 aa)
Tgfb2Transforming growth factor beta-2 isoform X1. (442 aa)
Flvcr1MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein. (560 aa)
Mthfd1lMonofunctional C1-tetrahydrofolate synthase, mitochondrial. (977 aa)
NodalNodal homolog. (354 aa)
Slc39a3Solute carrier family 39 (zinc transporter), member 1/2/3. (317 aa)
Chst11Carbohydrate sulfotransferase 11 isoform X1. (352 aa)
Alx1Cartilage homeoprotein 1. (326 aa)
Myf5Myogenic factor 5. (255 aa)
Wnt9aWingless-type MMTV integration site family, member 9. (365 aa)
Lhx1LIM/homeobox protein Lhx1. (406 aa)
NogNoggin. (232 aa)
Hoxb9Homeobox protein HoxB/C/D9. (250 aa)
Hoxb8Homeobox protein HoxB/C/D8. (243 aa)
Hoxb7Homeobox protein HoxA/B7. (219 aa)
Hoxb6Homeobox protein HoxA/B/C6. (224 aa)
Hoxb5Homeobox protein HoxA/B/C5. (269 aa)
Hoxb4Homeobox protein HoxA/B/C/D4. (250 aa)
Hoxb3Homeobox protein Hox-B3 isoform X1. (435 aa)
Hoxb2Homeobox protein HoxA/B2. (354 aa)
Hoxb1Homeobox protein HoxA/B/D1. (297 aa)
Pcgf2Polycomb group RING finger protein 2. (342 aa)
Wnt9bWingless-type MMTV integration site family, member 9. (359 aa)
Eif4a3Eukaryotic initiation factor 4A-III. (411 aa)
Asxl2Additional sex combs like 2, transcriptional regulator. (1407 aa)
Osr1Protein odd-skipped-related 1. (266 aa)
MycnN-myc proto-oncogene protein. (462 aa)
Sox11Transcription factor SOX11/12 (SOX group C). (395 aa)
Med12Mediator of RNA polymerase II transcription subunit 12 isoform X1. (2190 aa)
Ctnnb1Catenin beta 1. (781 aa)
Tgfbr2TGF-beta receptor type-2 isoform X1. (592 aa)
Setd2[histone H3]-dimethyl-L-lysine36 N-methyltransferase. (2530 aa)
Hyal1Hyaluronidase-1 isoform X1. (462 aa)
Smad3Mothers against decapentaplegic homolog 3. (425 aa)
Dscaml1Down syndrome cell adhesion molecule-like protein 1. (2111 aa)
Foxc2Forkhead box protein C2. (494 aa)
Irx5Iroquois-class homeodomain protein IRX-5 isoform X1. (484 aa)
Fgfr2Fibroblast growth factor receptor 2 isoform X1. (838 aa)
FuzProtein fuzzy homolog isoform X1. (415 aa)
Megf8Multipile epidermal growth factor-like domains protein 8. (2789 aa)
Tulp3Tubby-related protein 3. (463 aa)
Hoxa11Homeobox protein Hox-A11. (315 aa)
Hoxa9Homeobox protein Hox-A9 isoform X1. (271 aa)
Twist1Twist-related protein 1. (206 aa)
Hoxa7Homeobox protein HoxA/B7. (229 aa)
Hoxa5Homeobox protein HoxA/B/C5. (270 aa)
Hoxa4Homeobox protein HoxA/B/C/D4. (285 aa)
Hoxa3Homeobox protein Hox-A3 isoform X1. (444 aa)
Hoxa2Homeobox protein HoxA/B2. (372 aa)
Hoxa1Homeobox protein Hox-A1 isoform X1. (336 aa)
PdgfraPlatelet-derived growth factor receptor alpha isoform X1. (1089 aa)
Wdr19WD repeat-containing protein 19. (1341 aa)
Hspg2Basement membrane-specific heparan sulfate proteoglycan core protein. (4347 aa)
Tgfbr1TGF-beta receptor type-1. (503 aa)
Pax5Paired box 5. (390 aa)
Mmp16Matrix metalloproteinase-16 (membrane-inserted). (607 aa)
Col11a1Collagen alpha-1(XI) chain isoform X1. (1804 aa)
Alx3Homeobox protein aristaless-like 3. (341 aa)
Tbx15T-box transcription factor TBX15 isoform X1. (602 aa)
Slc39a1Solute carrier family 39 (zinc transporter), member 1/2/3. (324 aa)
Shox2Short stature homeobox protein 2 isoform X1. (331 aa)
GnasGuanine nucleotide-binding protein G(s) subunit alpha isoforms XLas isoform X1. (1134 aa)
Bmp7Bone morphogenetic protein 7. (430 aa)
Alx4Homeobox protein aristaless-like 4. (399 aa)
Hoxd4Homeobox protein HoxA/B/C/D4. (250 aa)
Hoxd3Homeobox protein HoxA/B/D3. (433 aa)
Hoxd9Homeobox protein HoxB/C/D9. (338 aa)
Hoxd10Homeobox protein Hox-D10. (340 aa)
Hoxd11Homeobox protein HoxC/D11. (336 aa)
Dlx2Homeobox protein DLX-2. (332 aa)
Prrx2Paired mesoderm homeobox protein 2 isoform X1. (251 aa)
Bmi1Polycomb group RING finger protein 4. (324 aa)
Fgf8Fibroblast growth factor 8 isoform X1. (268 aa)
Men1Menin isoform X1. (617 aa)
Smad2Mothers against decapentaplegic homolog 2 isoform X1. (467 aa)
Ndst1Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1. (882 aa)
Zeb1Zinc finger E-box-binding homeobox 1. (1114 aa)
Six2Homeobox protein SIX2. (296 aa)
MdfiMyoD family inhibitor isoform X1. (246 aa)
Runx2Runt-related transcription factor 2 isoform X1. (594 aa)
Ift140Intraflagellar transport protein 140 homolog. (1464 aa)
Dlg1Disks large homolog 1 isoform X1. (927 aa)
Tbx1T-box transcription factor TBX1 isoform X1. (488 aa)
Hoxc4Homeobox protein HoxA/B/C/D4. (264 aa)
Hoxc9Homeobox protein HoxB/C/D9. (260 aa)
Hoxc11Homeobox protein HoxC/D11. (304 aa)
Col2a1Collagen alpha-1(II) chain isoform X1. (1487 aa)
Grhl2Transcription factor CP2 and related proteins. (625 aa)
Osr2Protein odd-skipped-related 2 isoform X1. (276 aa)
NipblCohesin loading factor subunit SCC2. (2798 aa)
Mmp14Matrix metalloproteinase-14 (membrane-inserted). (582 aa)
Bmp4Bone morphogenetic protein 4. (408 aa)
Mef2cMyocyte-specific enhancer factor 2C isoform X1. (483 aa)
Tfap2aTranscription factor AP-2-alpha isoform X1. (440 aa)
Gli3Transcriptional activator GLI3. (1583 aa)
Wdr60WD repeat-containing protein 60 isoform X1. (999 aa)
GscHomeobox protein goosecoid. (256 aa)
Tgfb3Transforming growth factor beta-3. (412 aa)
Six4Homeobox protein SIX4. (775 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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