(10 nodes) Keratin-associated protein, and Keratin, high sulfur B2 protein network (Rattus norvegicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D3ZUP1_RAT	Uncharacterized protein. (252 aa)
	Ccdc182	Coiled-coil domain-containing 182. (144 aa)
	D3ZNY7_RAT	Uncharacterized protein. (284 aa)
	LOC690478	Similar to keratin-associated protein 10-7. (305 aa)
	LOC690460	Similar to keratin-associated protein 10-7. (251 aa)
	LOC103694398	Uncharacterized protein. (280 aa)
	LOC687631	Similar to keratin-associated protein 10-10. (290 aa)
	RGD1561557	Similar to chromosome 21 open reading frame 29. (251 aa)
	LOC100365588	Keratin-associated protein 1-3-like. (131 aa)
	LOC686720	Uncharacterized protein. (232 aa)

Your Current Organism:

Rattus norvegicus

NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D3ZNY7_RAT	D3ZUP1_RAT	ENSRNOP00000060984	ENSRNOP00000001633	Uncharacterized protein.	Uncharacterized protein.	0.431
D3ZNY7_RAT	LOC103694398	ENSRNOP00000060984	ENSRNOP00000064622	Uncharacterized protein.	Uncharacterized protein.	0.404
D3ZNY7_RAT	LOC686720	ENSRNOP00000060984	ENSRNOP00000074991	Uncharacterized protein.	Uncharacterized protein.	0.470
D3ZNY7_RAT	LOC687631	ENSRNOP00000060984	ENSRNOP00000065996	Uncharacterized protein.	Similar to keratin-associated protein 10-10.	0.458
D3ZNY7_RAT	LOC690460	ENSRNOP00000060984	ENSRNOP00000063279	Uncharacterized protein.	Similar to keratin-associated protein 10-7.	0.441
D3ZNY7_RAT	LOC690478	ENSRNOP00000060984	ENSRNOP00000061908	Uncharacterized protein.	Similar to keratin-associated protein 10-7.	0.446
D3ZNY7_RAT	RGD1561557	ENSRNOP00000060984	ENSRNOP00000068557	Uncharacterized protein.	Similar to chromosome 21 open reading frame 29.	0.405
D3ZUP1_RAT	D3ZNY7_RAT	ENSRNOP00000001633	ENSRNOP00000060984	Uncharacterized protein.	Uncharacterized protein.	0.431
D3ZUP1_RAT	LOC103694398	ENSRNOP00000001633	ENSRNOP00000064622	Uncharacterized protein.	Uncharacterized protein.	0.406
D3ZUP1_RAT	LOC686720	ENSRNOP00000001633	ENSRNOP00000074991	Uncharacterized protein.	Uncharacterized protein.	0.471
D3ZUP1_RAT	LOC687631	ENSRNOP00000001633	ENSRNOP00000065996	Uncharacterized protein.	Similar to keratin-associated protein 10-10.	0.437
D3ZUP1_RAT	LOC690460	ENSRNOP00000001633	ENSRNOP00000063279	Uncharacterized protein.	Similar to keratin-associated protein 10-7.	0.446
D3ZUP1_RAT	LOC690478	ENSRNOP00000001633	ENSRNOP00000061908	Uncharacterized protein.	Similar to keratin-associated protein 10-7.	0.446
D3ZUP1_RAT	RGD1561557	ENSRNOP00000001633	ENSRNOP00000068557	Uncharacterized protein.	Similar to chromosome 21 open reading frame 29.	0.404
LOC100365588	LOC686720	ENSRNOP00000070461	ENSRNOP00000074991	Keratin-associated protein 1-3-like.	Uncharacterized protein.	0.430
LOC103694398	D3ZNY7_RAT	ENSRNOP00000064622	ENSRNOP00000060984	Uncharacterized protein.	Uncharacterized protein.	0.404
LOC103694398	D3ZUP1_RAT	ENSRNOP00000064622	ENSRNOP00000001633	Uncharacterized protein.	Uncharacterized protein.	0.406
LOC103694398	LOC686720	ENSRNOP00000064622	ENSRNOP00000074991	Uncharacterized protein.	Uncharacterized protein.	0.470
LOC103694398	LOC687631	ENSRNOP00000064622	ENSRNOP00000065996	Uncharacterized protein.	Similar to keratin-associated protein 10-10.	0.404
LOC103694398	LOC690460	ENSRNOP00000064622	ENSRNOP00000063279	Uncharacterized protein.	Similar to keratin-associated protein 10-7.	0.407

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