STRINGSTRING
all2981 all2981 ftsW ftsW alr0653 alr0653 all2952 all2952 alr4579 alr4579 pbpB pbpB alr5324 alr5324 alr5326 alr5326
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
all2981Penicillin-binding protein; ORF_ID:all2981. (640 aa)
ftsWCell division protein; ORF_ID:all0154; ftsW gene product; Belongs to the SEDS family. (396 aa)
alr0653Peptidoglycan glycosyltransferase RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (438 aa)
all2952Penicillin-binding protein; ORF_ID:all2952. (755 aa)
alr4579Penicillin-binding protein; ORF_ID:alr4579. (756 aa)
pbpBPenicillin-binding protein 2; ORF_ID:alr5101. (763 aa)
alr5324Penicillin-binding protein; ORF_ID:alr5324. (643 aa)
alr5326Penicillin-binding protein; ORF_ID:alr5326. (643 aa)
Your Current Organism:
Nostoc sp. PCC7120
NCBI taxonomy Id: 103690
Other names: Anabaena sp. (ATCC 27893), Anabaena sp. (PCC 7120), Anabaena sp. DCC D0672, Anabaena sp. PCC 7120, Anabaena sp. SAG 25.82, Anabaena sp. UTEX B 2576, Anabaena variabilis UTCC 387, N. sp. PCC 7120, Nostoc muscorum ISU, Nostoc sp. AKM24, Nostoc sp. ATCC 27347, Nostoc sp. ATCC 72893, Nostoc sp. DSM 107007, Nostoc sp. Ind43, Nostoc sp. PCC 7120, Nostoc sp. SAG 25.82
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