(28 nodes) Mixed, incl. SRC2/BAP, C2 domain, and Casparian strip membrane protein/CASP-like protein network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045196	Uncharacterized protein. (132 aa)
	C1H46_043327	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (164 aa)
	C1H46_035759	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (164 aa)
	C1H46_035494	Uncharacterized protein. (203 aa)
	C1H46_035401	C2 domain-containing protein. (178 aa)
	C1H46_035402	C2 domain-containing protein. (178 aa)
	C1H46_035403	C2 domain-containing protein. (179 aa)
	C1H46_032949	Uncharacterized protein. (312 aa)
	C1H46_029605	Uncharacterized protein. (328 aa)
	C1H46_029170	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (164 aa)
	C1H46_028812	Phytocyanin domain-containing protein. (174 aa)
	C1H46_028579	HMA domain-containing protein. (159 aa)
	C1H46_026105	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (170 aa)
	C1H46_022154	Uncharacterized protein. (205 aa)
	C1H46_019756	HMA domain-containing protein. (158 aa)
	C1H46_019527	A20-type domain-containing protein. (130 aa)
	C1H46_019864	Uncharacterized protein. (312 aa)
	C1H46_011856	HMA domain-containing protein. (130 aa)
	C1H46_010992	Uncharacterized protein. (343 aa)
	C1H46_010131	BTB domain-containing protein. (963 aa)
	C1H46_010460	F-box domain-containing protein. (326 aa)
	C1H46_009863	C2 domain-containing protein. (179 aa)
	C1H46_010293	Uncharacterized protein. (275 aa)
	C1H46_009867	C2 domain-containing protein. (178 aa)
	C1H46_009149	Uncharacterized protein. (390 aa)
	C1H46_006058	Uncharacterized protein. (336 aa)
	C1H46_005888	Uncharacterized protein. (117 aa)
	C1H46_003579	RING-type domain-containing protein. (344 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_003579	C1H46_006058	A0A540NI19	A0A540NB54	RING-type domain-containing protein.	Uncharacterized protein.	0.403
C1H46_003579	C1H46_009863	A0A540NI19	A0A540N0I7	RING-type domain-containing protein.	C2 domain-containing protein.	0.480
C1H46_003579	C1H46_019527	A0A540NI19	A0A540M7U3	RING-type domain-containing protein.	A20-type domain-containing protein.	0.439
C1H46_003579	C1H46_019756	A0A540NI19	A0A540M6X5	RING-type domain-containing protein.	HMA domain-containing protein.	0.433
C1H46_003579	C1H46_026105	A0A540NI19	A0A540LPE2	RING-type domain-containing protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.405
C1H46_003579	C1H46_028579	A0A540NI19	A0A540LHQ7	RING-type domain-containing protein.	HMA domain-containing protein.	0.452
C1H46_003579	C1H46_035401	A0A540NI19	A0A540KXU1	RING-type domain-containing protein.	C2 domain-containing protein.	0.451
C1H46_003579	C1H46_035402	A0A540NI19	A0A540KXU2	RING-type domain-containing protein.	C2 domain-containing protein.	0.479
C1H46_005888	C1H46_006058	A0A540NCU4	A0A540NB54	Uncharacterized protein.	Uncharacterized protein.	0.409
C1H46_005888	C1H46_010293	A0A540NCU4	A0A540N0M9	Uncharacterized protein.	Uncharacterized protein.	0.563
C1H46_006058	C1H46_003579	A0A540NB54	A0A540NI19	Uncharacterized protein.	RING-type domain-containing protein.	0.403
C1H46_006058	C1H46_005888	A0A540NB54	A0A540NCU4	Uncharacterized protein.	Uncharacterized protein.	0.409
C1H46_006058	C1H46_009863	A0A540NB54	A0A540N0I7	Uncharacterized protein.	C2 domain-containing protein.	0.482
C1H46_006058	C1H46_009867	A0A540NB54	A0A540N204	Uncharacterized protein.	C2 domain-containing protein.	0.469
C1H46_006058	C1H46_010131	A0A540NB54	A0A540MZY7	Uncharacterized protein.	BTB domain-containing protein.	0.410
C1H46_006058	C1H46_019527	A0A540NB54	A0A540M7U3	Uncharacterized protein.	A20-type domain-containing protein.	0.482
C1H46_006058	C1H46_019756	A0A540NB54	A0A540M6X5	Uncharacterized protein.	HMA domain-containing protein.	0.482
C1H46_006058	C1H46_019864	A0A540NB54	A0A540M810	Uncharacterized protein.	Uncharacterized protein.	0.416
C1H46_006058	C1H46_022154	A0A540NB54	A0A540M1A1	Uncharacterized protein.	Uncharacterized protein.	0.511
C1H46_006058	C1H46_026105	A0A540NB54	A0A540LPE2	Uncharacterized protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.441