(114 nodes) SCF ubiquitin ligase complex network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_043920	ApaG domain-containing protein. (443 aa)
	C1H46_043011	Uncharacterized protein. (311 aa)
	C1H46_043008	Uncharacterized protein. (219 aa)
	C1H46_042912	Uncharacterized protein. (347 aa)
	C1H46_042632	Uncharacterized protein. (439 aa)
	C1H46_042324	Uncharacterized protein. (82 aa)
	C1H46_042134	Uncharacterized protein. (147 aa)
	C1H46_041367	Uncharacterized protein. (337 aa)
	C1H46_041368	Uncharacterized protein. (336 aa)
	C1H46_041120	Uncharacterized protein. (586 aa)
	C1H46_039230	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family. (454 aa)
	C1H46_038456	F-box domain-containing protein. (488 aa)
	C1H46_038457	PAS domain-containing protein. (99 aa)
	C1H46_038141	Uncharacterized protein. (176 aa)
	C1H46_015369	F-box domain-containing protein. (501 aa)
	C1H46_014912	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (127 aa)
	C1H46_014910	Uncharacterized protein. (58 aa)
	C1H46_014974	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	C1H46_015112	Uncharacterized protein. (373 aa)
	C1H46_015087	F-box domain-containing protein. (526 aa)
	C1H46_015164	F-box domain-containing protein. (196 aa)
	C1H46_015318	Uncharacterized protein. (78 aa)
	C1H46_015410	Uncharacterized protein. (356 aa)
	C1H46_015494	Uncharacterized protein. (335 aa)
	C1H46_015779	F-box domain-containing protein. (515 aa)
	C1H46_016141	F-box domain-containing protein. (580 aa)
	C1H46_016322	Uncharacterized protein. (473 aa)
	C1H46_016423	Uncharacterized protein; Belongs to the SKP1 family. (167 aa)
	C1H46_016552	Uncharacterized protein. (236 aa)
	C1H46_017283	Uncharacterized protein. (503 aa)
	C1H46_017740	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (146 aa)
	C1H46_018075	F-box domain-containing protein. (645 aa)
	C1H46_018224	F-box domain-containing protein. (500 aa)
	C1H46_018120	Uncharacterized protein; Belongs to the SKP1 family. (165 aa)
	C1H46_018219	Remorin_C domain-containing protein. (356 aa)
	C1H46_018481	F-box domain-containing protein. (659 aa)
	C1H46_018787	Uncharacterized protein. (584 aa)
	C1H46_018518	F-box domain-containing protein. (87 aa)
	C1H46_018546	Uncharacterized protein. (573 aa)
	C1H46_019413	F-box domain-containing protein. (584 aa)
	C1H46_020129	Uncharacterized protein. (437 aa)
	C1H46_020898	F-box domain-containing protein. (132 aa)
	C1H46_020977	Uncharacterized protein. (639 aa)
	C1H46_021285	Skp1_POZ domain-containing protein. (64 aa)
	C1H46_021570	Uncharacterized protein. (271 aa)
	C1H46_022530	Uncharacterized protein. (358 aa)
	C1H46_023436	Uncharacterized protein. (202 aa)
	C1H46_025603	F-box domain-containing protein. (327 aa)
	C1H46_025627	F-box domain-containing protein. (151 aa)
	C1H46_026051	Uncharacterized protein. (579 aa)
	C1H46_025926	Uncharacterized protein. (129 aa)
	C1H46_026030	F-box domain-containing protein. (646 aa)
	C1H46_026194	Uncharacterized protein. (568 aa)
	C1H46_026968	Transp_inhibit domain-containing protein. (90 aa)
	C1H46_027299	Uncharacterized protein. (411 aa)
	C1H46_028503	F-box domain-containing protein. (513 aa)
	C1H46_028658	Uncharacterized protein; Belongs to the SKP1 family. (194 aa)
	C1H46_028861	Transp_inhibit domain-containing protein. (74 aa)
	C1H46_029044	Uncharacterized protein. (804 aa)
	C1H46_029620	F-box domain-containing protein. (87 aa)
	C1H46_029758	Uncharacterized protein. (584 aa)
	C1H46_030472	RING-type domain-containing protein. (117 aa)
	C1H46_030476	RING-type domain-containing protein. (140 aa)
	C1H46_031475	Uncharacterized protein; Belongs to the SKP1 family. (357 aa)
	C1H46_031530	F-box domain-containing protein. (327 aa)
	C1H46_032088	Uncharacterized protein. (580 aa)
	C1H46_033453	Uncharacterized protein; Belongs to the SKP1 family. (194 aa)
	C1H46_033646	Uncharacterized protein. (605 aa)
	C1H46_033817	F-box domain-containing protein. (465 aa)
	C1H46_034466	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (81 aa)
	C1H46_034866	Uncharacterized protein. (173 aa)
	C1H46_034974	Uncharacterized protein. (312 aa)
	C1H46_035502	Uncharacterized protein. (463 aa)
	C1H46_035928	F-box domain-containing protein. (531 aa)
	C1H46_036733	Uncharacterized protein; Belongs to the SKP1 family. (207 aa)
	C1H46_037150	Uncharacterized protein. (478 aa)
	C1H46_037621	Uncharacterized protein. (554 aa)
	C1H46_045775	Uncharacterized protein. (142 aa)
	C1H46_044650	Uncharacterized protein. (119 aa)
	C1H46_043536	PAS domain-containing protein. (632 aa)
	C1H46_000980	Transp_inhibit domain-containing protein. (75 aa)
	C1H46_000715	F-box domain-containing protein. (607 aa)
	C1H46_000899	F-box domain-containing protein. (391 aa)
	C1H46_001933	Uncharacterized protein. (510 aa)
	C1H46_002970	Uncharacterized protein; Belongs to the SKP1 family. (135 aa)
	C1H46_003606	Uncharacterized protein. (395 aa)
	C1H46_003376	Transp_inhibit domain-containing protein. (275 aa)
	C1H46_003621	F-box domain-containing protein. (198 aa)
	C1H46_004657	F-box domain-containing protein. (503 aa)
	C1H46_004946	Uncharacterized protein. (279 aa)
	C1H46_006880	Uncharacterized protein; Belongs to the SKP1 family. (156 aa)
	C1H46_006911	F-box domain-containing protein. (344 aa)
	C1H46_006991	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (159 aa)
	C1H46_007726	F-box domain-containing protein. (161 aa)
	C1H46_007346	Uncharacterized protein. (500 aa)
	C1H46_007871	Skp1_POZ domain-containing protein. (95 aa)
	C1H46_007441	F-box domain-containing protein. (380 aa)
	C1H46_007727	Uncharacterized protein. (154 aa)
	C1H46_008515	Uncharacterized protein. (240 aa)
	C1H46_008850	F-box_5 domain-containing protein. (722 aa)
	C1H46_008911	Uncharacterized protein; Belongs to the SKP1 family. (155 aa)
	C1H46_001129	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (88 aa)
	C1H46_010131	BTB domain-containing protein. (963 aa)
	C1H46_010784	PAS domain-containing protein. (103 aa)
	C1H46_010286	F-box_5 domain-containing protein. (664 aa)
	C1H46_010785	F-box domain-containing protein. (488 aa)
	C1H46_011390	F-box domain-containing protein. (476 aa)
	C1H46_012079	F-box domain-containing protein. (624 aa)
	C1H46_012927	F-box domain-containing protein. (447 aa)
	C1H46_012963	Uncharacterized protein; Belongs to the SKP1 family. (190 aa)
	C1H46_013858	Uncharacterized protein; Belongs to the SKP1 family. (454 aa)
	C1H46_013926	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (81 aa)
	C1H46_014473	Uncharacterized protein. (267 aa)
	C1H46_014819	Uncharacterized protein; Belongs to the SKP1 family. (363 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000715	C1H46_006911	A0A540NRP4	A0A540N962	F-box domain-containing protein.	F-box domain-containing protein.	0.478
C1H46_000899	C1H46_030472	A0A540NR93	A0A540LC82	F-box domain-containing protein.	RING-type domain-containing protein.	0.570
C1H46_000899	C1H46_030476	A0A540NR93	A0A540LBX4	F-box domain-containing protein.	RING-type domain-containing protein.	0.570
C1H46_000980	C1H46_008850	A0A540NS15	A0A540N399	Transp_inhibit domain-containing protein.	F-box_5 domain-containing protein.	0.541
C1H46_000980	C1H46_014473	A0A540NS15	A0A540MNK7	Transp_inhibit domain-containing protein.	Uncharacterized protein.	0.586
C1H46_000980	C1H46_026194	A0A540NS15	A0A540LPB2	Transp_inhibit domain-containing protein.	Uncharacterized protein.	0.906
C1H46_000980	C1H46_028861	A0A540NS15	A0A540LGJ3	Transp_inhibit domain-containing protein.	Transp_inhibit domain-containing protein.	0.934
C1H46_000980	C1H46_030472	A0A540NS15	A0A540LC82	Transp_inhibit domain-containing protein.	RING-type domain-containing protein.	0.665
C1H46_000980	C1H46_030476	A0A540NS15	A0A540LBX4	Transp_inhibit domain-containing protein.	RING-type domain-containing protein.	0.665
C1H46_000980	C1H46_037150	A0A540NS15	A0A540KT17	Transp_inhibit domain-containing protein.	Uncharacterized protein.	0.875
C1H46_000980	C1H46_039230	A0A540NS15	A0A540KM44	Transp_inhibit domain-containing protein.	Secretory carrier-associated membrane protein; Probably involved in membrane trafficking. Belongs to the SCAMP family.	0.539
C1H46_001129	C1H46_002970	A0A540N0G9	A0A540NK39	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_006880	A0A540N0G9	A0A540NAP9	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_006991	A0A540N0G9	A0A540N8F7	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_007871	A0A540N0G9	A0A540N7N5	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Skp1_POZ domain-containing protein.	0.858
C1H46_001129	C1H46_008911	A0A540N0G9	A0A540N353	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_012963	A0A540N0G9	A0A540MRH9	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_013858	A0A540N0G9	A0A540MP20	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_013926	A0A540N0G9	A0A540MNN8	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.858
C1H46_001129	C1H46_014819	A0A540N0G9	A0A540MLC8	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	Uncharacterized protein; Belongs to the SKP1 family.	0.858