STRINGSTRING
PIIN_07813 PIIN_07813 PIIN_00072 PIIN_00072 PIIN_00081 PIIN_00081 PIIN_00089 PIIN_00089 PIIN_00102 PIIN_00102 PIIN_00261 PIIN_00261 PIIN_00367 PIIN_00367 PIIN_00375 PIIN_00375 PIIN_11715 PIIN_11715 PIIN_00625 PIIN_00625 PIIN_00635 PIIN_00635 PIIN_00617 PIIN_00617 PIIN_00732 PIIN_00732 PIIN_00749 PIIN_00749 PIIN_00738 PIIN_00738 PIIN_00782 PIIN_00782 PIIN_00805 PIIN_00805 PIIN_00879 PIIN_00879 PIIN_00855 PIIN_00855 PIIN_01006 PIIN_01006 PIIN_11757 PIIN_11757 PIIN_01421 PIIN_01421 PIIN_01533 PIIN_01533 PIIN_01585 PIIN_01585 PIIN_01596 PIIN_01596 PIIN_01645 PIIN_01645 FEN1 FEN1 PIIN_01635 PIIN_01635 PIIN_02173 PIIN_02173 PIIN_02218 PIIN_02218 PIIN_02251 PIIN_02251 PIIN_02433 PIIN_02433 PIIN_02405 PIIN_02405 PIIN_02406 PIIN_02406 PIIN_02408 PIIN_02408 PIIN_02501 PIIN_02501 PIIN_02585 PIIN_02585 PIIN_02669 PIIN_02669 PIIN_02695 PIIN_02695 PIIN_02947 PIIN_02947 PIIN_02995 PIIN_02995 PIIN_03372 PIIN_03372 PIIN_03514 PIIN_03514 PIIN_03556 PIIN_03556 PIIN_03616 PIIN_03616 PIIN_03690 PIIN_03690 PIIN_03894 PIIN_03894 PIIN_03917 PIIN_03917 PIIN_03936 PIIN_03936 PIIN_04103 PIIN_04103 PIIN_04105 PIIN_04105 PIIN_04186 PIIN_04186 PIIN_04247 PIIN_04247 PIIN_04464 PIIN_04464 PIIN_04564 PIIN_04564 PIIN_11783 PIIN_11783 PIIN_04573 PIIN_04573 PIIN_04574 PIIN_04574 PIIN_04709 PIIN_04709 PIIN_04860 PIIN_04860 PIIN_04913 PIIN_04913 PIIN_05117 PIIN_05117 PIIN_05179 PIIN_05179 SLX1 SLX1 PIIN_05523 PIIN_05523 PIIN_05584 PIIN_05584 PIIN_05729 PIIN_05729 PIIN_05928 PIIN_05928 PIIN_06083 PIIN_06083 PIIN_06335 PIIN_06335 PIIN_06361 PIIN_06361 PIIN_06534 PIIN_06534 PIIN_06638 PIIN_06638 PIIN_06685 PIIN_06685 PIIN_06695 PIIN_06695 PIIN_06698 PIIN_06698 PIIN_06722 PIIN_06722 PIIN_06792 PIIN_06792 PIIN_06794 PIIN_06794 PIIN_06810 PIIN_06810 PIIN_06814 PIIN_06814 PIIN_06872 PIIN_06872 PIIN_06938 PIIN_06938 PIIN_07356 PIIN_07356 PIIN_07401 PIIN_07401 PIIN_07433 PIIN_07433 PIIN_07867 PIIN_07867 PIIN_07913 PIIN_07913 PIIN_08367 PIIN_08367 PIIN_08607 PIIN_08607 PIIN_08962 PIIN_08962 PIIN_09183 PIIN_09183 PIIN_09184 PIIN_09184 PIIN_09229 PIIN_09229 PIIN_09291 PIIN_09291 PIIN_09432 PIIN_09432 PIIN_09504 PIIN_09504 PIIN_09692 PIIN_09692 PIIN_09698 PIIN_09698 PIIN_10044 PIIN_10044 PIIN_10123 PIIN_10123 PIIN_10219 PIIN_10219 PIIN_10252 PIIN_10252 PIIN_10390 PIIN_10390 PIIN_10436 PIIN_10436 PIIN_10487 PIIN_10487 PIIN_10530 PIIN_10530 PIIN_11896 PIIN_11896 PIIN_10590 PIIN_10590 PIIN_10607 PIIN_10607 PIIN_10716 PIIN_10716 PIIN_10733 PIIN_10733 PIIN_10778 PIIN_10778 PIIN_10784 PIIN_10784 PIIN_10788 PIIN_10788 PIIN_10911 PIIN_10911 PIIN_11384 PIIN_11384 PIIN_11432 PIIN_11432 PIIN_03414 PIIN_03414 PIIN_00543 PIIN_00543 PIIN_01724 PIIN_01724 PIIN_mit_LAG4 PIIN_mit_LAG4 cob cob PIIN_mit_LAG5 PIIN_mit_LAG5 PIIN_mit_LAG8 PIIN_mit_LAG8 PIIN_mit_LAG6 PIIN_mit_LAG6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PIIN_07813Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (681 aa)
PIIN_00072Related to REX2-Oligoribonuclease, mitochondrial. (243 aa)
PIIN_00081Piwi domain-containing protein. (867 aa)
PIIN_00089Uncharacterized protein. (329 aa)
PIIN_00102Related to endonuclease/exonuclease/phosphatase family protein-Penicillium marneffei. (296 aa)
PIIN_00261Related to argonaute-like protein-Laccaria bicolor; Belongs to the argonaute family. (926 aa)
PIIN_00367Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (865 aa)
PIIN_003755'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1438 aa)
PIIN_11715Related to lariat-debranching enzyme. (528 aa)
PIIN_00625Uncharacterized protein. (348 aa)
PIIN_00635Exonuclease domain-containing protein. (301 aa)
PIIN_00617Uncharacterized protein. (274 aa)
PIIN_00732Related to TRZ1-tRNase Z, involved in RNA processing. (795 aa)
PIIN_00749tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] (292 aa)
PIIN_00738Related to PAN2-component of Pab1p-stimulated poly(A) ribonuclease. (1054 aa)
PIIN_00782Uncharacterized protein. (277 aa)
PIIN_00805Related to Pol-like protein-Ciona intestinalis. (713 aa)
PIIN_00879Uncharacterized protein. (218 aa)
PIIN_00855Related to exonuclease GOR. (447 aa)
PIIN_01006Endonuclease. (335 aa)
PIIN_11757Uncharacterized protein. (205 aa)
PIIN_01421Probable 100 kDa protein P100. (916 aa)
PIIN_01533Related to deoxyribonuclease. (352 aa)
PIIN_01585Uncharacterized protein. (470 aa)
PIIN_01596Related to ribonuclease H. (656 aa)
PIIN_01645Uncharacterized protein. (739 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (366 aa)
PIIN_01635Related to LAS1-Protein involved in cell morphogenesis, cytoskeletal regulation and bud formation. (256 aa)
PIIN_02173Related to REX4-strong similarity to X.laevis XPMC2 protein. (397 aa)
PIIN_02218DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2263 aa)
PIIN_02251Related to IRE1-protein kinase. (1152 aa)
PIIN_02433Endo/exonuclease/phosphatase domain-containing protein. (260 aa)
PIIN_02405Uncharacterized protein. (286 aa)
PIIN_02406Uncharacterized protein. (527 aa)
PIIN_02408Uncharacterized protein. (450 aa)
PIIN_02501Uncharacterized protein. (131 aa)
PIIN_02585Related to ribonucleases; Belongs to the RNase T2 family. (412 aa)
PIIN_02669Uncharacterized protein. (1466 aa)
PIIN_02695Uncharacterized protein. (128 aa)
PIIN_02947DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1466 aa)
PIIN_02995Related to APN2-AP endonuclease, exonuclease III homolog. (715 aa)
PIIN_03372RNB domain-containing protein. (872 aa)
PIIN_03514DNA polymerase. (1069 aa)
PIIN_035563'-5' exonuclease domain-containing protein. (433 aa)
PIIN_03616Related to Ribonuclease P protein subunit p30. (325 aa)
PIIN_03690Related to QDE-2 post-transcriptional gene silencing protein QDE-2; Belongs to the argonaute family. (980 aa)
PIIN_03894PINc domain-containing protein. (376 aa)
PIIN_03917Probable Pelota protein. (377 aa)
PIIN_03936Uncharacterized protein. (525 aa)
PIIN_04103Related to probable RNA helicase MPH1. (1197 aa)
PIIN_04105DRMBL domain-containing protein. (741 aa)
PIIN_0418620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (439 aa)
PIIN_04247Related to tRNA-splicing endonuclease. (427 aa)
PIIN_04464Related to ribonuclease H1, putative-Talaromyces stipitatus. (281 aa)
PIIN_04564Uncharacterized protein. (212 aa)
PIIN_11783Related to ribonuclease H1. (448 aa)
PIIN_04573Uncharacterized protein. (156 aa)
PIIN_04574Uncharacterized protein. (355 aa)
PIIN_04709Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome. (1153 aa)
PIIN_04860Uncharacterized protein. (463 aa)
PIIN_04913Uncharacterized protein. (485 aa)
PIIN_05117Related to MKT1-retroviral protease signature protein. (817 aa)
PIIN_05179Uncharacterized protein. (803 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (428 aa)
PIIN_05523PINc domain-containing protein. (1138 aa)
PIIN_05584Related to YSH1-component of pre-mRNA polyadenylation factor PF I. (756 aa)
PIIN_05729Related to CCR4-component of the major cytoplasmic deadenylase (C-terminal). (618 aa)
PIIN_05928Related to QDE-2 post-transcriptional gene silencing protein QDE-2. (793 aa)
PIIN_06083Related to RCL1-RNA terminal phosphate cyclase-like protein. (355 aa)
PIIN_06335Uncharacterized protein. (94 aa)
PIIN_06361Lactamase_B domain-containing protein. (589 aa)
PIIN_06534Related to exonuclease, RNase T and DNA polymerase III-Flavobacterium johnsoniae. (221 aa)
PIIN_06638Uncharacterized protein. (636 aa)
PIIN_06685Related to dna excision repair protein ercc-1. (247 aa)
PIIN_06695annotation not available (196 aa)
PIIN_06698Uncharacterized protein. (377 aa)
PIIN_06722Related to EXO1-exonuclease which interacts with Msh2p. (827 aa)
PIIN_06792Related to RAI1-Rat1p Interacting Protein, required for pre-rRNA processing. (413 aa)
PIIN_06794Related to RAD1-component of the nucleotide excision repairosome. (921 aa)
PIIN_06810Uncharacterized protein. (525 aa)
PIIN_06814Probable DIS3 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA; Belongs to the RNR ribonuclease family. (1006 aa)
PIIN_06872Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (379 aa)
PIIN_06938Uncharacterized protein. (191 aa)
PIIN_07356Uncharacterized protein. (182 aa)
PIIN_07401Uncharacterized protein. (1244 aa)
PIIN_07433Related to DNA helicase. (1090 aa)
PIIN_07867Related to DNA repair endonuclease rad2. (978 aa)
PIIN_07913RNase III domain-containing protein. (106 aa)
PIIN_08367Uncharacterized protein. (289 aa)
PIIN_08607Related to MRPL3-Mitochondrial ribosomal protein, large subunit. (475 aa)
PIIN_08962Related to RAD27-ssDNA endonuclease and 5`-3`exonuclease. (498 aa)
PIIN_09183RNase III domain-containing protein. (144 aa)
PIIN_09184Uncharacterized protein. (435 aa)
PIIN_09229Related to nucleolar 100K polymyositis-scleroderma protein. (847 aa)
PIIN_09291Uncharacterized protein. (375 aa)
PIIN_09432Related to Ribonuclease Z / related to thiamin pyrophosphokinase 1. (321 aa)
PIIN_09504Related to nuclease PA3. (252 aa)
PIIN_09692Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial. (1447 aa)
PIIN_09698Related to UV-endonuclease UVE-1. (627 aa)
PIIN_10044Uncharacterized protein. (901 aa)
PIIN_10123RNase H domain-containing protein. (319 aa)
PIIN_10219RNase H domain-containing protein. (397 aa)
PIIN_10252Uncharacterized protein. (429 aa)
PIIN_10390Reverse transcriptase domain-containing protein. (696 aa)
PIIN_10436RNase H domain-containing protein. (107 aa)
PIIN_10487Uncharacterized protein. (924 aa)
PIIN_10530Uncharacterized protein. (320 aa)
PIIN_11896Uncharacterized protein. (82 aa)
PIIN_10590Related to tRNA splicing endonuclease beta subunit. (386 aa)
PIIN_10607Uncharacterized protein. (375 aa)
PIIN_10716Reverse transcriptase domain-containing protein. (609 aa)
PIIN_10733Uncharacterized protein. (471 aa)
PIIN_10778Reverse transcriptase domain-containing protein. (529 aa)
PIIN_10784Probable CCR4-NOT transcription complex, subunit 7. (371 aa)
PIIN_10788Reverse transcriptase domain-containing protein. (496 aa)
PIIN_10911Reverse transcriptase domain-containing protein. (429 aa)
PIIN_11384Reverse transcriptase domain-containing protein. (306 aa)
PIIN_11432Related to PSO2-DNA repair protein. (217 aa)
PIIN_03414Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1418 aa)
PIIN_00543Smr domain-containing protein. (545 aa)
PIIN_01724Uncharacterized protein. (540 aa)
PIIN_mit_LAG4Probable intron-encoded LAGLIDADG endonuclease. (186 aa)
cobProbable intron-encoded LAGLIDADG endonuclease. (250 aa)
PIIN_mit_LAG5Related to LAGLIDADG endonuclease. (133 aa)
PIIN_mit_LAG8Probable intron-encoded LAGLIDADG endonuclease. (229 aa)
PIIN_mit_LAG6Related to LAGLIDADG endonuclease. (191 aa)
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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