8 items (Streptomyces collinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGS68606.1	COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (398 aa)
	AGS68936.1	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (283 aa)
	AGS68937.1	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (246 aa)
	AGS72924.1	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit. (251 aa)
	AGS72923.1	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit. (214 aa)
	AGS68953.1	COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (406 aa)
	AGS72944.1	Fatty acid-CoA racemase; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family. (394 aa)
	AGS72926.1	Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (320 aa)

Your Current Organism:

Streptomyces collinus

NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGS68936.1	AGS68937.1	B446_10570	B446_10575	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.999
AGS68936.1	AGS72923.1	B446_10570	B446_30595	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.972
AGS68937.1	AGS68936.1	B446_10575	B446_10570	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	0.999
AGS68937.1	AGS72924.1	B446_10575	B446_30600	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	0.947
AGS68937.1	AGS72926.1	B446_10575	B446_30610	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).	0.947
AGS72923.1	AGS68936.1	B446_30595	B446_10570	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	0.972
AGS72923.1	AGS72924.1	B446_30595	B446_30600	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	0.999
AGS72923.1	AGS72926.1	B446_30595	B446_30610	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).	0.947
AGS72924.1	AGS68937.1	B446_30600	B446_10575	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.947
AGS72924.1	AGS72923.1	B446_30600	B446_30595	COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.999
AGS72926.1	AGS68937.1	B446_30610	B446_10575	Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).	CoA-transferase subunit beta; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.947
AGS72926.1	AGS72923.1	B446_30610	B446_30595	Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).	COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.	0.947