STRINGSTRING
GCA_000497835_00650 GCA_000497835_00650 nicP_4 nicP_4 nicP_5 nicP_5 GCA_000497835_02108 GCA_000497835_02108 GCA_000497835_02250 GCA_000497835_02250 skp skp pagL pagL GCA_000497835_03402 GCA_000497835_03402 ygiF ygiF nicP_8 nicP_8 GCA_000497835_04503 GCA_000497835_04503
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000497835_00650Hypothetical protein. (123 aa)
nicP_4Porin-like protein NicP. (438 aa)
nicP_5Porin-like protein NicP. (415 aa)
GCA_000497835_02108Hypothetical protein. (263 aa)
GCA_000497835_02250Hypothetical protein. (236 aa)
skpChaperone protein Skp. (145 aa)
pagLLipid A deacylase PagL. (175 aa)
GCA_000497835_03402Hypothetical protein. (233 aa)
ygiFInorganic triphosphatase. (455 aa)
nicP_8Porin-like protein NicP. (456 aa)
GCA_000497835_04503Hypothetical protein. (99 aa)
Your Current Organism:
gamma proteobacterium L18
NCBI taxonomy Id: 1229486
Other names: g. proteobacterium L18
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