STRINGSTRING
xanB xanB crp crp AGA32597.1 AGA32597.1 fnrA fnrA AGA32868.1 AGA32868.1 AGA32931.1 AGA32931.1 yhhW yhhW AGA33532.1 AGA33532.1 rmlC rmlC crp-2 crp-2 anr anr AGA33978.1 AGA33978.1 AGA34104.1 AGA34104.1 AGA34108.1 AGA34108.1 AGA34500.1 AGA34500.1 AGA34502.1 AGA34502.1 AGA34732.1 AGA34732.1 AGA34950.1 AGA34950.1 AGA34956.1 AGA34956.1 AGA35300.1 AGA35300.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xanBMannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family. (470 aa)
crpCRP transcriptional dual regulator/ cyclic AMP receptor protein. (211 aa)
AGA32597.1Pirin; Belongs to the pirin family. (310 aa)
fnrACRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (239 aa)
AGA32868.1Pirin; Belongs to the pirin family. (400 aa)
AGA32931.1CRP transcriptional dual regulator/ cyclic AMP receptor protein. (222 aa)
yhhWPirin; Belongs to the pirin family. (289 aa)
AGA33532.1CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (188 aa)
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (188 aa)
crp-2CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase. (204 aa)
anrTranscriptional regulator, Crp/Fnr family. (243 aa)
AGA33978.1Cupin 2 conserved barrel domain protein. (139 aa)
AGA34104.1Cupin 2 conserved barrel domain protein. (112 aa)
AGA34108.1Putative enzyme of the cupin superfamily protein. (94 aa)
AGA34500.1Cupin 2 conserved barrel domain protein. (185 aa)
AGA34502.1Cupin 2 conserved barrel domain protein. (61 aa)
AGA34732.1Putative signal-transduction protein containing cAMP-binding and CBS domains. (624 aa)
AGA34950.1Cupin 2 conserved barrel domain protein. (56 aa)
AGA34956.1Cupin 2 conserved barrel domain protein. (122 aa)
AGA35300.1Pirin-related protein; Belongs to the pirin family. (116 aa)
Your Current Organism:
Thioalkalivibrio nitratireducens
NCBI taxonomy Id: 1255043
Other names: T. nitratireducens DSM 14787, Thioalkalivibrio nitratireducens ALEN 2, Thioalkalivibrio nitratireducens DSM 14787, Thioalkalivibrio nitratireducens str. DSM 14787, Thioalkalivibrio nitratireducens strain DSM 14787
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