STRINGSTRING
GCA_000378625_01025 GCA_000378625_01025 GCA_000378625_01620 GCA_000378625_01620 GCA_000378625_02398 GCA_000378625_02398 GCA_000378625_02869 GCA_000378625_02869 GCA_000378625_04497 GCA_000378625_04497
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000378625_01025Unannotated protein. (1477 aa)
GCA_000378625_01620Unannotated protein. (1145 aa)
GCA_000378625_02398Unannotated protein. (1391 aa)
GCA_000378625_02869Unannotated protein. (943 aa)
GCA_000378625_04497Unannotated protein. (1160 aa)
Your Current Organism:
Colwellia piezophila
NCBI taxonomy Id: 1265503
Other names: C. piezophila ATCC BAA-637, Colwellia piezophila ATCC BAA-637
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