(14 nodes) Zinc finger, PHD-type, conserved site network (Daedalea quercina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A165S4F6	Uncharacterized protein. (1903 aa)
	A0A165S5I9	Chromatin modification-related protein. (292 aa)
	A0A165TEF5	Chromatin modification-related protein. (695 aa)
	A0A165UBA2	PHD-type domain-containing protein. (1014 aa)
	A0A165LMR7	PHD-type domain-containing protein. (520 aa)
	A0A165MM49	PHD domain-containing protein. (1083 aa)
	A0A165ND35	Chromatin modification-related protein. (444 aa)
	A0A165NE00	Clavaminate synthase-like protein. (709 aa)
	A0A165PP30	PHD-type domain-containing protein. (1439 aa)
	A0A165PWJ2	Uncharacterized protein. (1319 aa)
	A0A165Q633	PHD-type domain-containing protein. (902 aa)
	A0A165QBF2	RCC1/BLIP-II protein. (562 aa)
	A0A165RD74	UBR-type domain-containing protein. (433 aa)
	A0A165RXA4	HORMA-domain-containing protein. (897 aa)

Your Current Organism:

Daedalea quercina

NCBI taxonomy Id: 1314783
Other names: D. quercina L-15889, Daedalea quercina L-15889

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A165LMR7	A0A165NE00	PHD-type domain-containing protein.	Clavaminate synthase-like protein.	0.432
A0A165LMR7	A0A165S4F6	PHD-type domain-containing protein.	Uncharacterized protein.	0.892
A0A165MM49	A0A165QBF2	PHD domain-containing protein.	RCC1/BLIP-II protein.	0.543
A0A165ND35	A0A165PWJ2	Chromatin modification-related protein.	Uncharacterized protein.	0.870
A0A165NE00	A0A165LMR7	Clavaminate synthase-like protein.	PHD-type domain-containing protein.	0.432
A0A165NE00	A0A165S4F6	Clavaminate synthase-like protein.	Uncharacterized protein.	0.827
A0A165PP30	A0A165UBA2	PHD-type domain-containing protein.	PHD-type domain-containing protein.	0.631
A0A165PWJ2	A0A165ND35	Uncharacterized protein.	Chromatin modification-related protein.	0.870
A0A165PWJ2	A0A165S4F6	Uncharacterized protein.	Uncharacterized protein.	0.490
A0A165PWJ2	A0A165S5I9	Uncharacterized protein.	Chromatin modification-related protein.	0.870
A0A165PWJ2	A0A165TEF5	Uncharacterized protein.	Chromatin modification-related protein.	0.826
A0A165Q633	A0A165S4F6	PHD-type domain-containing protein.	Uncharacterized protein.	0.886
A0A165Q633	A0A165TEF5	PHD-type domain-containing protein.	Chromatin modification-related protein.	0.415
A0A165QBF2	A0A165MM49	RCC1/BLIP-II protein.	PHD domain-containing protein.	0.543
A0A165S4F6	A0A165LMR7	Uncharacterized protein.	PHD-type domain-containing protein.	0.892
A0A165S4F6	A0A165NE00	Uncharacterized protein.	Clavaminate synthase-like protein.	0.827
A0A165S4F6	A0A165PWJ2	Uncharacterized protein.	Uncharacterized protein.	0.490
A0A165S4F6	A0A165Q633	Uncharacterized protein.	PHD-type domain-containing protein.	0.886
A0A165S5I9	A0A165PWJ2	Chromatin modification-related protein.	Uncharacterized protein.	0.870
A0A165TEF5	A0A165PWJ2	Chromatin modification-related protein.	Uncharacterized protein.	0.826