STRINGSTRING
DSY4004 DSY4004 DSY5020 DSY5020 cutD cutD DSY4958 DSY4958 DSY4847 DSY4847 DSY4776 DSY4776 DSY4423 DSY4423 DSY4265 DSY4265 DSY4030 DSY4030 DSY4027 DSY4027 moaA-2 moaA-2 DSY3831 DSY3831 DSY3600 DSY3600 DSY3519 DSY3519 DSY3493 DSY3493 DSY3492 DSY3492 moaA moaA DSY3169 DSY3169 DSY3136 DSY3136 DSY3126 DSY3126 DSY3074 DSY3074 DSY3009 DSY3009 DSY2850 DSY2850 DSY2702 DSY2702 rlmN rlmN DSY2535 DSY2535 DSY2448 DSY2448 DSY2223 DSY2223 DSY2221 DSY2221 DSY1983 DSY1983 DSY1968 DSY1968 rimO rimO DSY1772 DSY1772 miaB miaB DSY1551 DSY1551 DSY1522 DSY1522 DSY1007 DSY1007 DSY0904 DSY0904 DSY0879 DSY0879 DSY0417 DSY0417 DSY0396 DSY0396 DSY0170 DSY0170 DSY0083 DSY0083
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DSY4004Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 9E-75). (306 aa)
DSY5020Hypothetical protein; Similarity to COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (476 aa)
cutDPyruvate-formate lyase-activating enzyme; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). (327 aa)
DSY4958Hypothetical protein; Similarity to COG0502 Biotin synthase and related enzymes(Evalue: 8E-31). (374 aa)
DSY4847Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 1E-101). (581 aa)
DSY4776Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases. (127 aa)
DSY4423Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 9E-45). (456 aa)
DSY4265Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 2E-62). (364 aa)
DSY4030Hypothetical protein; Similarity to COG1242 Uncharacterized Fe-S oxidoreductases(Evalue: 1E-106). (334 aa)
DSY4027Hypothetical protein; Similarity to COG1509 Lysine 2,3-aminomutase(Evalue: 3E-97). (413 aa)
moaA-2Hypothetical protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (323 aa)
DSY3831Hypothetical protein; Similarity to COG0502 Biotin synthase and related enzymes(Evalue: 2E-25). (373 aa)
DSY3600Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 7E-26). (425 aa)
DSY3519Hypothetical protein; Similarity to COG1964 Predicted Fe-S oxidoreductases(Evalue: 3E-64). (441 aa)
DSY3493Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 7E-70). (335 aa)
DSY3492Hypothetical protein; Similarity to COG0502 Biotin synthase and related enzymes. (360 aa)
moaAHypothetical protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (326 aa)
DSY3169Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 1E-154). (618 aa)
DSY3136Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (381 aa)
DSY3126Hypothetical protein; Similarity to COG0621 2-methylthioadenine synthetase(Evalue: 1E-123). (441 aa)
DSY3074Hypothetical protein; Similarity to COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (369 aa)
DSY3009Similarity to COG1180 Pyruvate-formate lyase-activating enzyme(Evalue: 2E-46). (288 aa)
DSY2850Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 5E-65). (461 aa)
DSY2702Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 5E-69). (303 aa)
rlmNHypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (357 aa)
DSY2535Hypothetical protein. (435 aa)
DSY2448Hypothetical protein; Similarity to COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases(Evalue: 9E-90). (518 aa)
DSY2223Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 1E-94). (391 aa)
DSY2221Hypothetical protein; Similarity to COG0535 Predicted Fe-S oxidoreductases(Evalue: 1E-57). (332 aa)
DSY1983Hypothetical protein; Similarity to COG1964 Predicted Fe-S oxidoreductases(Evalue: 7E-77). (437 aa)
DSY1968Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 1E-149). (642 aa)
rimOHypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (445 aa)
DSY1772Hypothetical protein; Similarity to COG2108 Uncharacterized ACR related to pyruvate formate-lyase activating enzyme. (440 aa)
miaBHypothetical protein; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (447 aa)
DSY1551Similarity to COG1180 Pyruvate-formate lyase-activating enzyme(Evalue: 3E-77). (322 aa)
DSY1522Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 5E-67). (291 aa)
DSY1007Hypothetical protein; Similarity to COG1533 DNA repair photolyase(Evalue: 2E-29). (295 aa)
DSY0904Hypothetical protein; Similarity to COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases(Evalue: 8E-28). (384 aa)
DSY0879Hypothetical protein; Similarity to COG1964 Predicted Fe-S oxidoreductases(Evalue: 8E-79). (471 aa)
DSY0417Similarity to COG1180 Pyruvate-formate lyase-activating enzyme(Evalue: 5E-60). (310 aa)
DSY0396Hypothetical protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (170 aa)
DSY0170Hypothetical protein; Similarity to COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (465 aa)
DSY0083Hypothetical protein; Similarity to COG1032 Fe-S oxidoreductases family 2(Evalue: 2E-47). (445 aa)
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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