Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGW40309.1 | AGW42020.1 | O159_00280 | O159_20250 | Penicillin binding protein transpeptidase domain-containing protein. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase. | 0.404 |
| AGW40309.1 | ddl | O159_00280 | O159_10020 | Penicillin binding protein transpeptidase domain-containing protein. | D-alanine:D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.467 |
| AGW40309.1 | ftsZ | O159_00280 | O159_16270 | Penicillin binding protein transpeptidase domain-containing protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.701 |
| AGW40309.1 | mraY | O159_00280 | O159_16320 | Penicillin binding protein transpeptidase domain-containing protein. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.508 |
| AGW40309.1 | murB | O159_00280 | O159_02710 | Penicillin binding protein transpeptidase domain-containing protein. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.401 |
| AGW40309.1 | murC | O159_00280 | O159_16290 | Penicillin binding protein transpeptidase domain-containing protein. | UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.610 |
| AGW40309.1 | murD | O159_00280 | O159_16310 | Penicillin binding protein transpeptidase domain-containing protein. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.574 |
| AGW40309.1 | murE | O159_00280 | O159_16340 | Penicillin binding protein transpeptidase domain-containing protein. | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.664 |
| AGW40309.1 | murF | O159_00280 | O159_16330 | Penicillin binding protein transpeptidase domain-containing protein. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.556 |
| AGW40309.1 | murG | O159_00280 | O159_16300 | Penicillin binding protein transpeptidase domain-containing protein. | Cell division protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the SEDS family. | 0.712 |
| AGW40423.1 | AGW40578.1 | O159_01730 | O159_03630 | Two-component system regulatory protein. | Hypothetical protein. | 0.525 |
| AGW40423.1 | AGW41169.1 | O159_01730 | O159_10660 | Two-component system regulatory protein. | Cysteine desulfurase. | 0.420 |
| AGW40423.1 | AGW41355.1 | O159_01730 | O159_12780 | Two-component system regulatory protein. | Iron-regulated ABC-type transporter. | 0.435 |
| AGW40423.1 | AGW41356.1 | O159_01730 | O159_12790 | Two-component system regulatory protein. | ABC transporter membrane component. | 0.435 |
| AGW40423.1 | AGW41843.1 | O159_01730 | O159_18090 | Two-component system regulatory protein. | NifU-like protein. | 0.737 |
| AGW40423.1 | AGW41922.1 | O159_01730 | O159_19030 | Two-component system regulatory protein. | Cysteine desulfurase. | 0.420 |
| AGW40449.1 | AGW40957.1 | O159_02070 | O159_08000 | ATP-dependent RNA helicase. | ATP-dependent RNA helicase. | 0.590 |
| AGW40449.1 | AGW41902.1 | O159_02070 | O159_18790 | ATP-dependent RNA helicase. | GTP-binding protein elongation factor. | 0.501 |
| AGW40449.1 | prfB | O159_02070 | O159_09160 | ATP-dependent RNA helicase. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.523 |
| AGW40449.1 | rsfS | O159_02070 | O159_15050 | ATP-dependent RNA helicase. | Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.556 |
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