(16 nodes) Mixed, incl. Malaria, and ACT domain network (Ceraceosorus guamensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A316VPT6	Uncharacterized protein. (563 aa)
	A0A316VSU8	Uncharacterized protein. (979 aa)
	A0A316VUN0	Uncharacterized protein. (144 aa)
	A0A316VUX6	Phytase-like domain-containing protein. (502 aa)
	A0A316VW81	Uncharacterized protein. (731 aa)
	A0A316VZN2	Uncharacterized protein. (1005 aa)
	A0A316W0H8	Zn(2)-C6 fungal-type domain-containing protein. (951 aa)
	A0A316W0J9	Uncharacterized protein. (1162 aa)
	A0A316W1W2	Uncharacterized protein. (1000 aa)
	A0A316W2X0	Uncharacterized protein. (446 aa)
	A0A316W2Y1	Uncharacterized protein. (965 aa)
	A0A316W3H7	Annexin. (462 aa)
	A0A316W3M5	EXPERA domain-containing protein. (287 aa)
	A0A316W4T0	Uncharacterized protein. (753 aa)
	A0A316W800	Uncharacterized protein. (722 aa)
	A0A316W8C4	Zn(2)-C6 fungal-type domain-containing protein. (1086 aa)

Your Current Organism:

Ceraceosorus guamensis

NCBI taxonomy Id: 1522189
Other names: C. guamensis, CBS 139631, Ceraceosorus guamensis T. Kij. & Aime, 2016, Ceraceosorus sp. MCA 4658, Ceraceosorus sp. MCA4658, MCA 4658, NRRL 66309

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Export your current network:

... as a bitmap image:

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file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A316VPT6	A0A316VUN0	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A316VPT6	A0A316W0J9	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A316VPT6	A0A316W1W2	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A316VPT6	A0A316W2X0	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A316VPT6	A0A316W3H7	Uncharacterized protein.	Annexin.	0.655
A0A316VPT6	A0A316W4T0	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A316VSU8	A0A316VUN0	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A316VSU8	A0A316W1W2	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A316VSU8	A0A316W4T0	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A316VUN0	A0A316VPT6	Uncharacterized protein.	Uncharacterized protein.	0.599
A0A316VUN0	A0A316VSU8	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A316VUN0	A0A316VUX6	Uncharacterized protein.	Phytase-like domain-containing protein.	0.681
A0A316VUN0	A0A316VW81	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A316VUN0	A0A316VZN2	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A316VUN0	A0A316W0H8	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.599
A0A316VUN0	A0A316W0J9	Uncharacterized protein.	Uncharacterized protein.	0.553
A0A316VUN0	A0A316W2X0	Uncharacterized protein.	Uncharacterized protein.	0.553
A0A316VUN0	A0A316W2Y1	Uncharacterized protein.	Uncharacterized protein.	0.704
A0A316VUN0	A0A316W3H7	Uncharacterized protein.	Annexin.	0.616
A0A316VUN0	A0A316W3M5	Uncharacterized protein.	EXPERA domain-containing protein.	0.599

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