STRINGSTRING
glnS glnS tilS tilS argS argS nadE nadE guaA guaA AIQ44979.1 AIQ44979.1 AIQ45035.1 AIQ45035.1 AIQ45038.1 AIQ45038.1 AIQ45090.1 AIQ45090.1 AIQ45602.1 AIQ45602.1 nadD nadD tyrS tyrS AIQ46563.1 AIQ46563.1 metG metG tyrS-2 tyrS-2 AIQ46953.1 AIQ46953.1 AIQ46977.1 AIQ46977.1 coaD coaD tmcAL tmcAL lysS-2 lysS-2 AIQ47120.1 AIQ47120.1 AIQ47199.1 AIQ47199.1 AIQ47428.1 AIQ47428.1 queC queC AIQ47632.1 AIQ47632.1 AIQ47721.1 AIQ47721.1 AIQ47814.1 AIQ47814.1 panC panC metG-2 metG-2 nadE-2 nadE-2 AIQ48473.1 AIQ48473.1 ileS ileS thiI thiI leuS leuS mnmA mnmA valS valS AIQ48994.1 AIQ48994.1 argS-2 argS-2 AIQ49038.1 AIQ49038.1 trpS trpS AIQ49457.1 AIQ49457.1 AIQ49482.1 AIQ49482.1 sat sat cysH cysH cysS cysS gltX gltX argG argG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glnSglutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)
tilStRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (480 aa)
argSarginine--tRNA ligase; Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
nadENAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. (269 aa)
guaAGMP synthase; Catalyzes the synthesis of GMP from XMP. (512 aa)
AIQ44979.1Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
AIQ45035.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
AIQ45038.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
AIQ45090.1Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)
AIQ45602.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
nadDNicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (200 aa)
tyrStyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. (420 aa)
AIQ46563.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
metGmethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (553 aa)
tyrS-2tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. (417 aa)
AIQ46953.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
AIQ46977.1Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (456 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (169 aa)
tmcALNucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (412 aa)
lysS-2lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (519 aa)
AIQ47120.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
AIQ47199.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (907 aa)
AIQ47428.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
queC7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). (220 aa)
AIQ47632.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
AIQ47721.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
AIQ47814.1Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family. (315 aa)
panCPantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (296 aa)
metG-2methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. (675 aa)
nadE-2NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (645 aa)
AIQ48473.1Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
ileSisoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1030 aa)
thiIThiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (413 aa)
leuSleucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (816 aa)
mnmAThiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (377 aa)
valSvaline--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (878 aa)
AIQ48994.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
argS-2arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)
AIQ49038.1Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)
trpStryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (329 aa)
AIQ49457.1glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (559 aa)
AIQ49482.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (777 aa)
satATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
cysHPhosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. (230 aa)
cysScysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (468 aa)
gltXglutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (487 aa)
argGArgininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (411 aa)
Your Current Organism:
Paenibacillus sp. FSLR70273
NCBI taxonomy Id: 1536772
Other names: P. sp. FSL R7-0273, Paenibacillus sp. FSL R7-0273
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