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Daro_0133 Daro_0133 Daro_0424 Daro_0424 Daro_1579 Daro_1579 Daro_1662 Daro_1662 Daro_2195 Daro_2195 Daro_3099 Daro_3099 Daro_3508 Daro_3508 Daro_3571 Daro_3571 Daro_3623 Daro_3623 Daro_3754 Daro_3754 Daro_3954 Daro_3954
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Daro_0133Diguanylate cyclase/phosphodiesterase. (694 aa)
Daro_0424PAS:GGDEF protein. (715 aa)
Daro_1579Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1093 aa)
Daro_1662Diguanylate cyclase with PAS/PAC sensor. (820 aa)
Daro_2195Type IV pilus assembly PilZ. (120 aa)
Daro_3099Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s). (1038 aa)
Daro_3508Diguanylate cyclase. (638 aa)
Daro_3571Diguanylate cyclase/phosphodiesterase. (611 aa)
Daro_3623Diguanylate cyclase with PAS/PAC sensor. (583 aa)
Daro_3754Diguanylate cyclase/phosphodiesterase. (561 aa)
Daro_3954PAS:GGDEF:Hemerythrin HHE cation binding region. (667 aa)
Your Current Organism:
Dechloromonas aromatica
NCBI taxonomy Id: 159087
Other names: D. aromatica RCB, Dechloromonas aromatica RCB, Dechloromonas aromatica str. RCB, Dechloromonas sp. RCB
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