(36 nodes) Small GTPase network (Phytophthora ramorum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H3G694_PHYRM	Uncharacterized protein. (153 aa)
	H3G6L4_PHYRM	Uncharacterized protein. (181 aa)
	H3G6T1_PHYRM	Uncharacterized protein. (210 aa)
	H3G7J3_PHYRM	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (214 aa)
	H3G8G7_PHYRM	Uncharacterized protein. (200 aa)
	H3G8U7_PHYRM	Uncharacterized protein. (218 aa)
	H3G8X5_PHYRM	Ras-like proteinRas-related protein Ypt1. (201 aa)
	H3G915_PHYRM	Uncharacterized protein. (160 aa)
	H3G925_PHYRM	Uncharacterized protein. (207 aa)
	H3G9C7_PHYRM	Uncharacterized protein. (213 aa)
	H3G9D1_PHYRM	Uncharacterized protein. (214 aa)
	H3G9M6_PHYRM	Uncharacterized protein. (197 aa)
	H3GA69_PHYRM	Uncharacterized protein. (220 aa)
	H3GA75_PHYRM	Uncharacterized protein. (227 aa)
	H3GAE8_PHYRM	Uncharacterized protein. (197 aa)
	H3GB56_PHYRM	Uncharacterized protein. (195 aa)
	H3GC27_PHYRM	Uncharacterized protein. (220 aa)
	H3GHE9_PHYRM	Uncharacterized protein. (648 aa)
	H3GIE7_PHYRM	Uncharacterized protein. (352 aa)
	H3GJM6_PHYRM	Uncharacterized protein. (201 aa)
	H3GKV8_PHYRM	Uncharacterized protein. (1386 aa)
	H3GLF1_PHYRM	Uncharacterized protein. (414 aa)
	H3G5A9_PHYRM	Uncharacterized protein. (202 aa)
	H3GM54_PHYRM	Uncharacterized protein. (332 aa)
	H3GTY6_PHYRM	Uncharacterized protein. (315 aa)
	H3GWU5_PHYRM	Uncharacterized protein. (365 aa)
	H3GYQ8_PHYRM	Uncharacterized protein. (224 aa)
	H3H019_PHYRM	Uncharacterized protein. (482 aa)
	H3H2J0_PHYRM	Uncharacterized protein. (236 aa)
	H3HAQ4_PHYRM	Uncharacterized protein. (218 aa)
	H3HBM9_PHYRM	Uncharacterized protein. (201 aa)
	H3HCG7_PHYRM	Uncharacterized protein. (207 aa)
	H3HDG0_PHYRM	Uncharacterized protein. (181 aa)
	H3HE30_PHYRM	Uncharacterized protein. (269 aa)
	H3G5K5_PHYRM	Uncharacterized protein. (184 aa)
	H3G613_PHYRM	Uncharacterized protein. (166 aa)

Your Current Organism:

Phytophthora ramorum

NCBI taxonomy Id: 164328
Other names: BBA 9/95, CBS 101553, CPHST BL 55G, Ex-type CPHST BL 55G, P. ramorum, Phytophthora sp. ex Parrotia persica, Sudden oak death agent, WPC P10103, ramorum blight, sudden oak death

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H3G5A9_PHYRM	H3G5K5_PHYRM	H3G5A9	H3G5K5	Uncharacterized protein.	Uncharacterized protein.	0.642
H3G5A9_PHYRM	H3G613_PHYRM	H3G5A9	H3G613	Uncharacterized protein.	Uncharacterized protein.	0.549
H3G5A9_PHYRM	H3G694_PHYRM	H3G5A9	H3G694	Uncharacterized protein.	Uncharacterized protein.	0.489
H3G5A9_PHYRM	H3G6T1_PHYRM	H3G5A9	H3G6T1	Uncharacterized protein.	Uncharacterized protein.	0.623
H3G5A9_PHYRM	H3G8G7_PHYRM	H3G5A9	H3G8G7	Uncharacterized protein.	Uncharacterized protein.	0.644
H3G5A9_PHYRM	H3G8U7_PHYRM	H3G5A9	H3G8U7	Uncharacterized protein.	Uncharacterized protein.	0.625
H3G5A9_PHYRM	H3G8X5_PHYRM	H3G5A9	H3G8X5	Uncharacterized protein.	Ras-like proteinRas-related protein Ypt1.	0.748
H3G5A9_PHYRM	H3G915_PHYRM	H3G5A9	H3G915	Uncharacterized protein.	Uncharacterized protein.	0.633
H3G5A9_PHYRM	H3G925_PHYRM	H3G5A9	H3G925	Uncharacterized protein.	Uncharacterized protein.	0.902
H3G5A9_PHYRM	H3G9C7_PHYRM	H3G5A9	H3G9C7	Uncharacterized protein.	Uncharacterized protein.	0.509
H3G5A9_PHYRM	H3G9M6_PHYRM	H3G5A9	H3G9M6	Uncharacterized protein.	Uncharacterized protein.	0.645
H3G5A9_PHYRM	H3GA69_PHYRM	H3G5A9	H3GA69	Uncharacterized protein.	Uncharacterized protein.	0.500
H3G5A9_PHYRM	H3GAE8_PHYRM	H3G5A9	H3GAE8	Uncharacterized protein.	Uncharacterized protein.	0.664
H3G5A9_PHYRM	H3GB56_PHYRM	H3G5A9	H3GB56	Uncharacterized protein.	Uncharacterized protein.	0.679
H3G5A9_PHYRM	H3GC27_PHYRM	H3G5A9	H3GC27	Uncharacterized protein.	Uncharacterized protein.	0.750
H3G5A9_PHYRM	H3GHE9_PHYRM	H3G5A9	H3GHE9	Uncharacterized protein.	Uncharacterized protein.	0.455
H3G5A9_PHYRM	H3GJM6_PHYRM	H3G5A9	H3GJM6	Uncharacterized protein.	Uncharacterized protein.	0.645
H3G5A9_PHYRM	H3GKV8_PHYRM	H3G5A9	H3GKV8	Uncharacterized protein.	Uncharacterized protein.	0.455
H3G5A9_PHYRM	H3GM54_PHYRM	H3G5A9	H3GM54	Uncharacterized protein.	Uncharacterized protein.	0.638
H3G5A9_PHYRM	H3GTY6_PHYRM	H3G5A9	H3GTY6	Uncharacterized protein.	Uncharacterized protein.	0.622

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