(18 nodes) Biosynthesis of siderophore group nonribosomal peptides network (Streptomyces puniciscabiei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOR29809.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2717 aa)
	AOR30854.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (5506 aa)
	AOR36934.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2707 aa)
	AOR31281.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (2685 aa)
	AOR31282.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1245 aa)
	AOR31300.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (950 aa)
	AOR31545.1	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1863 aa)
	AOR31553.1	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1657 aa)
	AOR31554.1	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2592 aa)
	AOR31555.1	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2886 aa)
	AOR32262.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	AOR32303.1	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
	AOR32335.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1072 aa)
	AOR34251.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (5310 aa)
	AOR37352.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)
	AOR34514.1	Adenylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
	AOR35736.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (2539 aa)
	AOR36055.1	IS200/IS605 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)

Your Current Organism:

Streptomyces puniciscabiei

NCBI taxonomy Id: 164348
Other names: KACC 20253, LMG 21391, LMG:21391, S. puniciscabiei, Streptomyces puniciscabiei Park et al. 2003, Streptomyces sp. S77, strain S77

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOR29809.1	AOR30854.1	BFF78_00745	BFF78_07115	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.957
AOR29809.1	AOR31281.1	BFF78_00745	BFF78_09735	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.472
AOR29809.1	AOR31300.1	BFF78_00745	BFF78_09860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
AOR29809.1	AOR31545.1	BFF78_00745	BFF78_11260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.868
AOR29809.1	AOR31553.1	BFF78_00745	BFF78_11305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
AOR29809.1	AOR31554.1	BFF78_00745	BFF78_11310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
AOR29809.1	AOR32303.1	BFF78_00745	BFF78_15605	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
AOR29809.1	AOR32335.1	BFF78_00745	BFF78_15780	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.846
AOR29809.1	AOR34251.1	BFF78_00745	BFF78_27205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
AOR29809.1	AOR35736.1	BFF78_00745	BFF78_35840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
AOR30854.1	AOR29809.1	BFF78_07115	BFF78_00745	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AOR30854.1	AOR31281.1	BFF78_07115	BFF78_09735	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999
AOR30854.1	AOR31282.1	BFF78_07115	BFF78_09740	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.950
AOR30854.1	AOR31300.1	BFF78_07115	BFF78_09860	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AOR30854.1	AOR31545.1	BFF78_07115	BFF78_11260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type I polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AOR30854.1	AOR31553.1	BFF78_07115	BFF78_11305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AOR30854.1	AOR31554.1	BFF78_07115	BFF78_11310	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AOR30854.1	AOR31555.1	BFF78_07115	BFF78_11315	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AOR30854.1	AOR32303.1	BFF78_07115	BFF78_15605	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
AOR30854.1	AOR32335.1	BFF78_07115	BFF78_15780	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.999

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