STRINGSTRING
AMY18364.1 AMY18364.1 ectC ectC glsA glsA manA manA iolB iolB AMY20019.1 AMY20019.1 AMY21149.1 AMY21149.1 AMY20070.1 AMY20070.1 AMY20181.1 AMY20181.1 AMY20193.1 AMY20193.1 AMY20616.1 AMY20616.1 yhhW yhhW crp crp AMY21138.1 AMY21138.1 rmlC rmlC glnL glnL rfbC rfbC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMY18364.1Hypothetical protein. (145 aa)
ectCL-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. (132 aa)
glsAThermolabile glutaminase; Belongs to the glutaminase family. (608 aa)
manAMannose-6-phosphate isomerase. (416 aa)
iolB5-deoxy-glucuronate isomerase. (302 aa)
AMY20019.1Hypothetical protein. (108 aa)
AMY21149.1Putative quercetin 2,3-dioxygenase; Belongs to the pirin family. (257 aa)
AMY20070.1Hypothetical protein. (160 aa)
AMY20181.1Hypothetical protein. (188 aa)
AMY20193.1Hypothetical protein. (198 aa)
AMY20616.1Hypothetical protein. (206 aa)
yhhWQuercetin 2,3-dioxygenase; Belongs to the pirin family. (309 aa)
crpcAMP receptor protein. (224 aa)
AMY21138.1Putative quercetin 2,3-dioxygenase; Belongs to the pirin family. (247 aa)
rmlCdTDP-4-dehydrorhamnose 3,5-epimerase. (185 aa)
glnLNitrogen regulation protein NR(II). (489 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase. (186 aa)
Your Current Organism:
Rhodococcus sp. PBTS1
NCBI taxonomy Id: 1653478
Other names: R. sp. PBTS 1, Rhodococcus sp. PBTS 1
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