(15 nodes) Transposase activity, and Caspase domain network (Magnetospirillum sp. XM1)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	XM1_2312	Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (124 aa)
	XM1_2439	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (342 aa)
	XM1_2440	Protein of unknown function; Homologs of previously reported genes of unknown function. (84 aa)
	XM1_2441	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (165 aa)
	XM1_2442	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (125 aa)
	XM1_2463	Homologs of previously reported genes of unknown function. (670 aa)
	XM1_2464	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (102 aa)
	XM1_2465	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (142 aa)
	XM1_2466	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (402 aa)
	XM1_2467	Putative integrase/recombinase y4qK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (285 aa)
	XM1_2468	Exported protein of unknown function; No homology to any previously reported sequences. (113 aa)
	XM1_2976	Transposase, IS4 family; Function of strongly homologous gene; enzyme. (125 aa)
	XM1_2977	Transposase of IS1355, IS5 family; Function of strongly homologous gene; enzyme. (155 aa)
	XM1_2978	Protein of unknown function; No homology to any previously reported sequences. (99 aa)
	XM1_2979	Protein of unknown function (MCP-signal associated domain 26-94); No homology to any previously reported sequences. (141 aa)

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
XM1_2312	XM1_2441	Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.528
XM1_2312	XM1_2464	Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.780
XM1_2312	XM1_2977	Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Transposase of IS1355, IS5 family; Function of strongly homologous gene; enzyme.	0.530
XM1_2439	XM1_2440	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function; Homologs of previously reported genes of unknown function.	0.417
XM1_2439	XM1_2441	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.417
XM1_2439	XM1_2442	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.417
XM1_2440	XM1_2439	Protein of unknown function; Homologs of previously reported genes of unknown function.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.417
XM1_2440	XM1_2441	Protein of unknown function; Homologs of previously reported genes of unknown function.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.773
XM1_2440	XM1_2442	Protein of unknown function; Homologs of previously reported genes of unknown function.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.773
XM1_2441	XM1_2312	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase of ISAli9, IS5 family subgroup IS427. ORFA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.528
XM1_2441	XM1_2439	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.417
XM1_2441	XM1_2440	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function; Homologs of previously reported genes of unknown function.	0.773
XM1_2441	XM1_2442	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.976
XM1_2441	XM1_2464	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.495
XM1_2441	XM1_2976	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Transposase, IS4 family; Function of strongly homologous gene; enzyme.	0.900
XM1_2442	XM1_2439	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.417
XM1_2442	XM1_2440	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function; Homologs of previously reported genes of unknown function.	0.773
XM1_2442	XM1_2441	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.976
XM1_2442	XM1_2465	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.426
XM1_2442	XM1_2977	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Transposase of IS1355, IS5 family; Function of strongly homologous gene; enzyme.	0.906