STRINGSTRING
rpl44e rpl44e rps24e rps24e rpl18a rpl18a rpl14e rpl14e rpl34e rpl34e rpl15e rpl15e rpl24e rpl24e rps19e rps19e rpl30e rpl30e rps13 rps13 rpl30 rpl30 rpl32e rpl32e rps4e rps4e rpl14 rpl14 rpl29 rpl29 rps19 rps19 rpl23 rpl23 rpl35ae rpl35ae rpl1 rpl1 rps3ae rps3ae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl44eLSU ribosomal protein L44E; Binds to the 23S rRNA. (94 aa)
rps24eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E). (99 aa)
rpl18aFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rplXA). (77 aa)
rpl14eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl14E). (83 aa)
rpl34eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl34E). (89 aa)
rpl15eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E). (194 aa)
rpl24eLSU ribosomal protein L24E; Binds to the 23S rRNA. (66 aa)
rps19eSSU ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (150 aa)
rpl30eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl30E). (99 aa)
rps13SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (148 aa)
rpl30Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl30P). (155 aa)
rpl32eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl32E). (130 aa)
rps4eFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps4E). (243 aa)
rpl14LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (141 aa)
rpl29Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl29P). (72 aa)
rps19SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (132 aa)
rpl23LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (88 aa)
rpl35aeFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl35AE). (87 aa)
rpl1LSU ribosomal protein L1P; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (216 aa)
rps3aeFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps3AE). (198 aa)
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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