STRINGSTRING
W5S_1225 W5S_1225 W5S_1226 W5S_1226 W5S_1227 W5S_1227 W5S_1228 W5S_1228 W5S_3810 W5S_3810 W5S_3811 W5S_3811 W5S_3812 W5S_3812 W5S_3815 W5S_3815
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5S_1225Maltose/maltodextrin transport system. (282 aa)
W5S_1226ABC maltose/maltodextrin transporter, permease subunit. (434 aa)
W5S_1227Maltodextrin-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family. (410 aa)
W5S_1228Maltose/maltodextrin ABC transporter, ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (360 aa)
W5S_3810Sn-glycerol-3-phosphate-binding protein. (349 aa)
W5S_3811Sugar-transport integral membrane protein ABC transporter UspA. (332 aa)
W5S_3812Maltose/maltodextrin ABC transporter, ATP-binding protein MalK; Belongs to the ABC transporter superfamily. (363 aa)
W5S_3815N-Acetyl-D-glucosamine ABC transport system sugar-binding protein. (435 aa)
Your Current Organism:
Pectobacterium parmentieri
NCBI taxonomy Id: 1905730
Other names: CFBP 8475, LMG 29774, LMG:29774, P. parmentieri, Pectobacterium parmentieri Khayi et al. 2016, Pectobacterium sp. SCC3193, strain RNS 08-42-1A, strain RNS 08.42.1A
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.