STRINGSTRING
X777_00138 X777_00138 X777_00555 X777_00555 X777_01046 X777_01046 X777_00554 X777_00554 DMN91_001210 DMN91_001210 X777_16479 X777_16479 X777_15570 X777_15570 DMN91_005468 DMN91_005468 DMN91_006072 DMN91_006072 X777_15410 X777_15410 LSM4 LSM4 X777_15149 X777_15149 X777_14184 X777_14184 DMN91_008328 DMN91_008328 DMN91_009772 DMN91_009772 X777_13871 X777_13871 DMN91_000397 DMN91_000397 DMN91_001093 DMN91_001093 DMN91_008983 DMN91_008983 X777_12173 X777_12173 X777_12351 X777_12351 DMN91_009086 DMN91_009086 DMN91_008875 DMN91_008875 DMN91_001553 DMN91_001553 DMN91_006364 DMN91_006364 DMN91_003350 DMN91_003350 DMN91_000861 DMN91_000861 DMN91_000917 DMN91_000917 X777_10817 X777_10817 X777_11636 X777_11636 DMN91_006312 DMN91_006312 X777_09988 X777_09988 X777_11160 X777_11160 DMN91_007521 DMN91_007521 X777_09736 X777_09736 DMN91_007031 DMN91_007031 X777_08892 X777_08892 DMN91_007533 DMN91_007533 X777_07999 X777_07999 DMN91_001935 DMN91_001935 X777_09254 X777_09254 DMN91_004995 DMN91_004995 DMN91_007407 DMN91_007407 DMN91_002376 DMN91_002376 DMN91_004655 DMN91_004655 X777_06907 X777_06907 DMN91_007730 DMN91_007730 X777_07105 X777_07105 X777_06595 X777_06595 DMN91_009530 DMN91_009530 DMN91_000267 DMN91_000267 LSM1 LSM1 X777_05972 X777_05972 DMN91_000693 DMN91_000693 X777_05973 X777_05973 X777_06515 X777_06515 DMN91_007433 DMN91_007433 DMN91_006771 DMN91_006771 DMN91_011561 DMN91_011561 DMN91_009373 DMN91_009373 X777_04542 X777_04542 DMN91_006535 DMN91_006535 DMN91_009003 DMN91_009003 DMN91_011507 DMN91_011507 DMN91_012130 DMN91_012130 DMN91_011318 DMN91_011318 DMN91_003280 DMN91_003280 X777_02912 X777_02912 DMN91_010321 DMN91_010321 DMN91_010315 DMN91_010315 DMN91_003394 DMN91_003394 DMN91_001084 DMN91_001084 DMN91_009679 DMN91_009679 X777_02763 X777_02763 X777_02761 X777_02761 DMN91_000086 DMN91_000086 DMN91_006635 DMN91_006635 X777_02574 X777_02574 DMN91_002642 DMN91_002642 DMN91_000987 DMN91_000987 DMN91_009851 DMN91_009851 DMN91_003379 DMN91_003379 DMN91_007336 DMN91_007336 X777_02131 X777_02131 X777_01391 X777_01391 X777_01473 X777_01473 X777_01546 X777_01546 X777_01232 X777_01232 X777_01387 X777_01387 DMN91_006057 DMN91_006057 DMN91_001886 DMN91_001886 X777_14714 X777_14714 LSM3 LSM3 DMN91_009503 DMN91_009503 DMN91_005804 DMN91_005804 DMN91_006051 DMN91_006051 X777_01475 X777_01475 X777_15713 X777_15713 DMN91_010609 DMN91_010609 DMN91_010971 DMN91_010971 DMN91_010475 DMN91_010475 X777_14853 X777_14853 DMN91_005431 DMN91_005431 X777_16170 X777_16170 DMN91_000720 DMN91_000720 DMN91_011160 DMN91_011160 X777_13489 X777_13489 X777_15075 X777_15075 DMN91_011112 DMN91_011112 X777_13556 X777_13556 DMN91_010499 DMN91_010499 LSM5 LSM5 X777_11354 X777_11354 DMN91_007483 DMN91_007483 X777_14361 X777_14361 X777_14584 X777_14584 X777_13104 X777_13104 DMN91_010707 DMN91_010707 X777_08387 X777_08387 DMN91_011209 DMN91_011209 X777_07793 X777_07793 X777_08388 X777_08388 DMN91_007826 DMN91_007826 DMN91_004171 DMN91_004171 DMN91_003878 DMN91_003878 DMN91_006130 DMN91_006130 X777_08411 X777_08411 DMN91_010738 DMN91_010738 X777_03435 X777_03435 X777_10042 X777_10042 DMN91_003751 DMN91_003751 DMN91_006082 DMN91_006082 LSM8 LSM8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
X777_00138Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
X777_00555Pre-mRNA-splicing factor CWC22-like protein. (371 aa)
X777_01046Pre-mRNA-processing factor. (459 aa)
X777_00554Pre-mRNA-splicing factor CWC22-like protein. (170 aa)
DMN91_001210U2 small nuclear ribonucleoprotein B. (231 aa)
X777_16479Splicing factor 3B subunit. (794 aa)
X777_15570Pre-mRNA-splicing factor SYF1. (753 aa)
DMN91_005468Cell division cycle 5-like protein. (783 aa)
DMN91_006072Leucine-rich repeat-containing protein C10orf11-like protein. (251 aa)
X777_15410Protein crooked neck. (682 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (149 aa)
X777_15149WD repeat-containing protein. (426 aa)
X777_14184Coiled-coil domain-containing protein. (149 aa)
DMN91_008328Putative U2 small nuclear ribonucleoprotein A. (246 aa)
DMN91_009772Splicing factor 3A subunit. (274 aa)
X777_13871WW domain-binding protein. (507 aa)
DMN91_000397Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (886 aa)
DMN91_001093Microfibrillar-associated protein. (453 aa)
DMN91_008983U4/U6 small nuclear ribonucleoprotein Prp31. (489 aa)
X777_12173U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (180 aa)
X777_12351Serine/arginine repetitive matrix protein. (1085 aa)
DMN91_009086U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
DMN91_008875Coiled-coil domain-containing protein. (342 aa)
DMN91_001553Beta-catenin-like protein. (578 aa)
DMN91_006364Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (176 aa)
DMN91_003350Smad nuclear interacting protein. (297 aa)
DMN91_000861RNA-binding motif protein, X-linked. (139 aa)
DMN91_000917Pre-mRNA-splicing factor syf2. (232 aa)
X777_10817Pre-mRNA-splicing factor CWC22-like protein. (621 aa)
X777_11636CWC15-like protein A. (223 aa)
DMN91_006312Gastrulation defective protein 1-like protein. (675 aa)
X777_09988Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (227 aa)
X777_11160CWF19-like protein. (606 aa)
DMN91_007521Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (501 aa)
X777_09736Splicing factor 3B subunit. (1218 aa)
DMN91_007031Uncharacterized protein. (2133 aa)
X777_08892Serrate RNA effector molecule-like protein. (911 aa)
DMN91_007533Nucleolar protein of 40 kDa. (260 aa)
X777_07999Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (105 aa)
DMN91_001935Small nuclear ribonucleoprotein G. (76 aa)
X777_09254Intron-binding protein aquarius. (1446 aa)
DMN91_004995Ubiquitin-like protein. (73 aa)
DMN91_007407U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
DMN91_002376NK-tumor recognition protein. (560 aa)
DMN91_004655U5 small nuclear ribonucleoprotein 40 kDa protein. (349 aa)
X777_06907Pre-mRNA-splicing factor 38A. (307 aa)
DMN91_007730U4/U6 small nuclear ribonucleoprotein Prp4. (523 aa)
X777_07105U4/U6 small nuclear ribonucleoprotein Prp3. (633 aa)
X777_06595Pleiotropic regulator. (300 aa)
DMN91_009530tRNA selenocysteine 1-associated protein. (295 aa)
DMN91_000267Squamous cell carcinoma antigen recognized by T-cells. (908 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (141 aa)
X777_05972U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (122 aa)
DMN91_000693Pre-mRNA-splicing factor RBM22. (413 aa)
X777_05973U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (270 aa)
X777_06515U4/U6.U5 tri-snRNP-associated protein. (711 aa)
DMN91_007433Transferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (710 aa)
DMN91_006771Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family. (785 aa)
DMN91_011561Phosphorylated adapter RNA export protein. (394 aa)
DMN91_009373Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
X777_04542Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
DMN91_006535U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. (175 aa)
DMN91_009003WW domain-containing adapter protein with coiled-coil. (649 aa)
DMN91_011507Splicing factor 3A subunit. (770 aa)
DMN91_012130Peptidyl-prolyl cis-trans isomerase-like protein. (522 aa)
DMN91_011318Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...] (165 aa)
DMN91_003280Uncharacterized protein. (572 aa)
X777_02912LIN1-like protein. (337 aa)
DMN91_010321U5 small nuclear ribonucleoprotein component. (979 aa)
DMN91_010315Leucine-rich repeat-containing protein. (197 aa)
DMN91_003394Pre-mRNA-splicing factor. (335 aa)
DMN91_001084Pre-mRNA-splicing factor SPF27. (247 aa)
DMN91_009679Splicing factor 3B subunit. (407 aa)
X777_02763RNA-binding protein. (260 aa)
X777_02761RNA-binding protein. (337 aa)
DMN91_000086U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (153 aa)
DMN91_006635WD40 repeat-containing protein SMU1. (510 aa)
X777_02574WW domain-binding protein. (322 aa)
DMN91_002642Uncharacterized protein. (706 aa)
DMN91_000987Protein FRG1. (258 aa)
DMN91_009851ATP-dependent RNA helicase DDX42; Belongs to the DEAD box helicase family. (769 aa)
DMN91_003379RNA-binding protein. (884 aa)
DMN91_007336Polyglutamine-binding protein. (297 aa)
X777_02131Putative ATP-dependent RNA helicase DHX35. (683 aa)
X777_01391Splicing factor 3A subunit. (500 aa)
X777_01473Zinc finger matrin-type protein. (167 aa)
X777_01546Serine/threonine-protein phosphatase 1 regulatory subunit. (1243 aa)
X777_01232Pre-mRNA branch site p14-like protein. (125 aa)
X777_01387Uncharacterized protein. (695 aa)
DMN91_006057Small nuclear ribonucleoprotein-associated protein. (216 aa)
DMN91_001886U4/U6.U5 tri-snRNP-associated protein. (524 aa)
X777_14714Pre-mRNA-splicing factor SLU7. (457 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (88 aa)
DMN91_009503Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
DMN91_005804Serine/threonine-protein kinase PRP4-like protein. (1034 aa)
DMN91_006051Transferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (723 aa)
X777_01475BUD13-like protein. (475 aa)
X777_15713Zinc finger matrin-type protein. (197 aa)
DMN91_010609Pre-mRNA-processing factor. (1030 aa)
DMN91_010971Uncharacterized protein. (249 aa)
DMN91_010475Protein Red. (530 aa)
X777_14853Pre-mRNA-processing factor. (931 aa)
DMN91_005431RING finger protein. (327 aa)
X777_16170Putative ATP-dependent RNA helicase DDX46. (1029 aa)
DMN91_000720Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1139 aa)
DMN91_011160Small nuclear ribonucleoprotein Sm D3. (142 aa)
X777_13489Small nuclear ribonucleoprotein Sm D2. (119 aa)
X777_15075Pre-mRNA-splicing factor Slu7. (332 aa)
DMN91_011112Nuclear cap-binding protein subunit. (794 aa)
X777_13556Pre-mRNA-splicing factor ISY1-like protein. (235 aa)
DMN91_010499Pre-mRNA-processing-splicing factor. (2372 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
X777_11354Transcription elongation regulator. (989 aa)
DMN91_007483Splicing factor 3B subunit. (704 aa)
X777_14361Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (184 aa)
X777_14584Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (142 aa)
X777_13104Peptidyl-prolyl cis-trans isomerase CWC27-like protein. (470 aa)
DMN91_010707U1 small nuclear ribonucleoprotein 70 kDa. (405 aa)
X777_08387Pre-mRNA-processing factor. (613 aa)
DMN91_011209U6 snRNA-associated Sm-like protein LSm7. (111 aa)
X777_07793Pleiotropic regulator. (459 aa)
X777_08388Microfibrillar-associated protein. (456 aa)
DMN91_007826Zinc finger matrin-type protein. (196 aa)
DMN91_004171BUD31-like protein. (144 aa)
DMN91_003878ATP-dependent RNA helicase DHX8. (1200 aa)
DMN91_006130Puff-specific protein Bx42. (542 aa)
X777_08411Pre-mRNA-processing factor 40-like protein A. (838 aa)
DMN91_010738PHD finger-like domain-containing protein 5A. (110 aa)
X777_03435Putative RNA-binding protein Luc7-like protein. (348 aa)
X777_10042Pre-mRNA-splicing factor CWC25-like protein. (452 aa)
DMN91_003751Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (85 aa)
DMN91_006082Peptidylprolyl isomerase domain and WD repeat-containing protein. (611 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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