STRINGSTRING
MED16 MED16 X777_09803 X777_09803 X777_09878 X777_09878 X777_09843 X777_09843 X777_07661 X777_07661 X777_05355 X777_05355 X777_02488 X777_02488 DMN91_000257 DMN91_000257 DMN91_011854 DMN91_011854 X777_14723 X777_14723 X777_13391 X777_13391 X777_15080 X777_15080 X777_13039 X777_13039 DMN91_005163 DMN91_005163 X777_14434 X777_14434 X777_07784 X777_07784
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MED16Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (783 aa)
X777_09803CCHC-type domain-containing protein. (512 aa)
X777_09878SEC13-like protein; Belongs to the WD repeat SEC13 family. (311 aa)
X777_09843DNA excision repair protein ERCC-6. (1073 aa)
X777_07661DUF1758 domain-containing protein. (562 aa)
X777_05355DUF1758 domain-containing protein. (504 aa)
X777_02488RNA-binding protein Rsf1. (196 aa)
DMN91_000257High mobility group protein DSP1. (472 aa)
DMN91_011854Nuclear pore complex protein Nup98-Nup96. (1922 aa)
X777_14723Serine/arginine-rich splicing factor 1A. (249 aa)
X777_13391Putative splicing factor, arginine/serine-rich. (488 aa)
X777_1508026S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (266 aa)
X777_13039Serine/arginine-rich splicing factor. (345 aa)
DMN91_005163Activated RNA polymerase II transcriptional coactivator p15. (115 aa)
X777_14434DUF1758 domain-containing protein. (514 aa)
X777_07784Serine/arginine-rich splicing factor. (177 aa)
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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