STRINGSTRING
glcD glcD glcE glcE glcF glcF aceB aceB aceA aceA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glcDGlycolate oxidase subunit glcD; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (500 aa)
glcEGlycolate oxidase subunit GlcE; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (350 aa)
glcFGlycolate oxidase iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (410 aa)
aceBMalate synthase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the malate synthase family. (532 aa)
aceAIsocitrate lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (443 aa)
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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