(25 nodes) Mixed, incl. Hemagglutinin repeat, and POTRA domain network (Erwinia sp. Ejp617)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADP10455.1	Putative hemagglutinin. (1752 aa)
	ADP10456.1	Putative hemolysin activator protein. (574 aa)
	ADP10708.1	Hypothetical protein. (51 aa)
	fhaB	FhaB. (3840 aa)
	shlB	ShlB. (545 aa)
	vanB	Putative vanillate O-demethylase oxidoreductase. (321 aa)
	vanA	Vanillate O-demethylase oxygenase subunit. (344 aa)
	ADP10834.1	Major facilitator superfamily MFS_1. (56 aa)
	ADP10835.1	Major facilitator superfamily MFS_1. (57 aa)
	csuE	Type I pilus protein. (326 aa)
	csuD	Type I pili usher protein. (806 aa)
	csuC	Type 1 pili usher pathway chaperone. (239 aa)
	csuB	Type I pilus protein. (175 aa)
	csuA	Type I pilus protein. (188 aa)
	ADP11500.1	Putative adhesin/hemagglutinin/hemolysin. (914 aa)
	ADP11518.1	Hypothetical protein. (64 aa)
	ADP11519.1	Putative adhesin/hemagglutinin/hemolysin. (1071 aa)
	ADP11520.1	Hypothetical protein. (90 aa)
	ADP11521.1	Putative adhesin/hemagglutinin/hemolysin. (635 aa)
	fhaB-3	Putative filamentous hemagglutinin. (184 aa)
	ADP11523.1	Putative adhesin/hemagglutinin/hemolysin. (2710 aa)
	ADP11524.1	Hemolysin activator protein. (585 aa)
	ADP11746.1	Curli production assembly/transport component CsgG. (191 aa)
	ADP11747.1	Putative lipoprotein. (116 aa)
	ADP11748.1	Putative lipoprotein. (216 aa)

Your Current Organism:

Erwinia sp. Ejp617

NCBI taxonomy Id: 215689
Other names: E. sp. Ejp617

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADP10455.1	ADP10456.1	EJP617_07740	EJP617_07750	Putative hemagglutinin.	Putative hemolysin activator protein.	0.924
ADP10455.1	ADP11500.1	EJP617_07740	EJP617_18190	Putative hemagglutinin.	Putative adhesin/hemagglutinin/hemolysin.	0.840
ADP10455.1	ADP11519.1	EJP617_07740	EJP617_18380	Putative hemagglutinin.	Putative adhesin/hemagglutinin/hemolysin.	0.782
ADP10455.1	ADP11521.1	EJP617_07740	EJP617_18400	Putative hemagglutinin.	Putative adhesin/hemagglutinin/hemolysin.	0.750
ADP10455.1	ADP11524.1	EJP617_07740	EJP617_18430	Putative hemagglutinin.	Hemolysin activator protein.	0.818
ADP10455.1	csuC	EJP617_07740	EJP617_16430	Putative hemagglutinin.	Type 1 pili usher pathway chaperone.	0.497
ADP10455.1	csuE	EJP617_07740	EJP617_16410	Putative hemagglutinin.	Type I pilus protein.	0.471
ADP10455.1	fhaB-3	EJP617_07740	EJP617_18410	Putative hemagglutinin.	Putative filamentous hemagglutinin.	0.763
ADP10455.1	shlB	EJP617_07740	EJP617_10290	Putative hemagglutinin.	ShlB.	0.815
ADP10456.1	ADP10455.1	EJP617_07750	EJP617_07740	Putative hemolysin activator protein.	Putative hemagglutinin.	0.924
ADP10456.1	ADP11500.1	EJP617_07750	EJP617_18190	Putative hemolysin activator protein.	Putative adhesin/hemagglutinin/hemolysin.	0.781
ADP10456.1	ADP11519.1	EJP617_07750	EJP617_18380	Putative hemolysin activator protein.	Putative adhesin/hemagglutinin/hemolysin.	0.786
ADP10456.1	ADP11521.1	EJP617_07750	EJP617_18400	Putative hemolysin activator protein.	Putative adhesin/hemagglutinin/hemolysin.	0.812
ADP10456.1	ADP11523.1	EJP617_07750	EJP617_18420	Putative hemolysin activator protein.	Putative adhesin/hemagglutinin/hemolysin.	0.815
ADP10456.1	csuC	EJP617_07750	EJP617_16430	Putative hemolysin activator protein.	Type 1 pili usher pathway chaperone.	0.772
ADP10456.1	csuD	EJP617_07750	EJP617_16420	Putative hemolysin activator protein.	Type I pili usher protein.	0.484
ADP10456.1	fhaB	EJP617_07750	EJP617_10280	Putative hemolysin activator protein.	FhaB.	0.501
ADP10456.1	fhaB-3	EJP617_07750	EJP617_18410	Putative hemolysin activator protein.	Putative filamentous hemagglutinin.	0.778
ADP10708.1	fhaB	EJP617_10270	EJP617_10280	Hypothetical protein.	FhaB.	0.526
ADP10708.1	shlB	EJP617_10270	EJP617_10290	Hypothetical protein.	ShlB.	0.525