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| | STY1669 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa) |
| | sscB | Putative pathogenicity island protein; Similar to Salmonella typhimurium SscB TR:O84950 (EMBL:AF020808) (144 aa) fasta scores: E(): 0, 99.3% id in 142 aa. (144 aa) |
| | STY1771 | Integration host factor alpha-subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. (99 aa) |
| | STY1775 | 50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity). (118 aa) |
| | STY1776 | 50S ribosomal subunit protein L35; Orthologue of E. coli rpmI (RL35_ECOLI); Fasta hit to RL35_ECOLI (64 aa), 100% identity in 64 aa overlap; Belongs to the bacterial ribosomal protein bL35 family. (65 aa) |
| | STY1816 | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] (649 aa) |
| | STY2062 | Similar to several including: Escherichia coli DNA replication protein DnaC or dnaD SW:DNAC_ECOLI (P07905) (245 aa) fasta scores: E(): 0, 49.2% id in 242 aa, Streptococcus thermophilus bacteriophage 7201 Orf5 TR:AAF26604 (EMBL:AF145054) (260 aa) fasta scores: E(): 6.3e-06, 23.3% id in 189 aa and Salmonella typhimurium hypothetical protein TR:O84893 (EMBL:AF001386) (249 aa) fasta scores: E(): 0, 56.6% id in 249 aa; Fasta hit to DNAC_ECOLI (245 aa), 49% identity in 242 aa overlap; Orthologue of E. coli P77546; Fasta hit to P77546 (248 aa), 96% identity in 248 aa overlap. (248 aa) |
| | STY2063 | Conserved hypothetical protein; C-terminus shows similarity to C-termini of Escherichia coli hypothetical protein YdaU SW:YDAU_ECOLI (P76065) (285 aa) fasta scores: E(): 0, 63.1% id in 179 aa and Salmonella typhimurium hypothetical protein TR:O84892 (EMBL:AF001386) (325 aa) fasta scores: E(): 8.6e-16, 34.7% id in 199 aa. (262 aa) |
| | STY2093 | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa) |
| | STY2115 | Putative copper homeostasis protein; Participates in the control of copper homeostasis. (259 aa) |
| | pduA | Similar to Salmonella typhimurium propanediol utilization protein PduA pduA SW:PDUA_SALTY (P37448) (97 aa) fasta scores: E(): 5.7e-31, 100.0% id in 90 aa and identical to Salmonella enterica serovar Typhimurium PduA pduA TR:AAB84107 (EMBL:AF026270) (94 aa) fasta scores: E(): 1.1e-32, 100.0% id in 94 aa. S. typhi pduA is probably not essential for propanediol catabolism (by similarity), but may be involved (cf. homologue in the eut operon). The Salmonella enterica homologue has been implicated in polyhedral body formation which may protect the cell from toxic metabolites, or protect the [...] (94 aa) |
| | pduB | Similar to Salmonella typhimurium propanediol utilization protein PduB pduB SW:PDUB_SALTY (P37449) (233 aa) fasta scores: E(): 0, 99.1% id in 233 aa. S. typhi pduB is probably not essential for propanediol catabolism (by similarity), but may be involved (cf. homologue in the eut operon). The Salmonella enterica homologue has been implicated in polyhedral body formation which may protect the cell from toxic metabolites, or protect the dehydratase from oxygen. (233 aa) |
| | pduC | Similar to Salmonella typhimurium glycerol dehydratase large subunit pduC SW:DHAB_SALTY (P37450) (554 aa) fasta scores: E(): 0, 99.6% id in 554 aa and Klebsiella oxytoca diol dehydratase alpha subunit pddA TR:Q59470 (EMBL:D45071) (554 aa) fasta scores: E(): 0, 99.6% id in 554 aa. (554 aa) |
| | pduD | Similar to Salmonella typhimurium diol dehydratase medium subunit pduD TR:O31041 (EMBL:AF026270) (224 aa) fasta scores: E(): 0, 98.2% id in 224 aa and Klebsiella oxytoca diol dehydratase beta subunit pddB TR:Q59471 (EMBL:D45071) (224 aa) fasta scores: E(): 0, 95.1% id in 224 aa. (224 aa) |
| | pduE | Similar to Salmonella typhimurium diol dehydratase small subunit pduE TR:O31042 (EMBL:AF026270) (173 aa) fasta scores: E(): 0, 99.4% id in 173 aa, and to Klebsiella oxytoca diol dehydratase gamma pddC TR:Q59472 (EMBL:D45071) (173 aa) fasta scores: E(): 0, 96.5% id in 173 aa. (173 aa) |
| | pduG | PduG protein; Similar to Salmonella enterica serovar Typhimurium protein PduG pduG TR:O31043 (EMBL:AF026270) (610 aa) fasta scores: E(): 0, 99.0% id in 610 aa and Klebsiella oxytoca diol dehydratase-reactivating factor large subunit ddrA TR:O68195 (EMBL:AF017781) (610 aa) fasta scores: E(): 0, 95.4% id in 608 aa. May be involved in removing inactive cofactor from the PduCDE dehydratase. Possibly also an adenosyltransferase (experimental). (610 aa) |
| | pduH | PduH protein; Similar to Salmonella enterica serovar Typhimurium protein PduH pduH TR:Q9XDN8 (EMBL:AF026270) (123 aa) fasta scores: E(): 0, 99.1% id in 111 aa and Klebsiella oxytoca diol dehydratase-reactivating factor small subunit ddrB TR:O68196 (EMBL:AF017781) (125 aa) fasta scores: E(): 0, 88.8% id in 116 aa. May be involved in removing inactive cofactor from the PduCDE dehydratase (in combination with pduG). A frameshift at codon 112 alters its C-terminus with respect to the homologues described above. (116 aa) |
| | pduJ | Putative propanediol utilization protein PduJ; Similar to Salmonella enterica serovar Typhimurium protein PduJ pduJ TR:Q9XDN7 (EMBL:AF026270) (91 aa) fasta scores: E(): 4.2e-31, 100.0% id in 91 aa, Salmonella typhimurium propanediol utilization protein PduA pduA SW:PDUA_SALTY (P37448) (97 aa) fasta scores: E(): 6.7e-24, 84.9% id in 86 aa and Salmonella typhimurium ethanolamine utilization protein EutM precursor eutM or cchA SW:EUTM_SALTY (P41791) (96 aa) fasta scores: E(): 4.1e-18, 64.4% id in 87 aa. The Salmonella enterica homologue has been implicated in polyhedral body formation whi [...] (91 aa) |
| | pduK | Putative propanediol utilization protein PduK; Similar to Salmonella enterica serovar Typhimurium protein PduK pduK TR:Q9XDN6 (EMBL:AF026270) (160 aa) fasta scores: E(): 0, 98.1% id in 160 aa. The Salmonella enterica homologue has been implicated in polyhedral body formation which may protect the cell from toxic metabolites, or protect the dehydratase from oxygen. (160 aa) |
| | pduL | Conserved hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (210 aa) |
| | pduM | Conserved hypothetical protein; Similar to Salmonella enterica serovar Typhimurium protein PduM pduM TR:Q9XDN4 (EMBL:AF026270) (163 aa) fasta scores: E(): 0, 96.3% id in 163 aa. (163 aa) |
| | pduO | Conserved hypothetical protein; Similar to Salmonella enterica serovar Typhimurium protein PduO pduO TR:Q9XDN2 (EMBL:AF026270) (337 aa) fasta scores: E(): 0, 92.6% id in 337 aa. N-terminal half is similar to many e.g. Clostridium pasteurianum hypothetical protein TR:O30452 (EMBL:AF006034) (173 aa) fasta scores: E(): 2.3e-21, 43.7% id in 167 aa and Citrobacter freundii hypothetical protein SW:YDHW_CITFR (P45515) (176 aa) fasta scores: E(): 3.2e-25, 47.9% id in 167 aa. C-terminal half is similar to many e.g. Clostridium pasteurianum hypothetical protein TR:O30453 (EMBL:AF006034) (143 aa) [...] (336 aa) |
| | pduP | Putative CoA-dependent proprionaldehyde dehydrogenase; Similar to Salmonella enterica serovar Typhimurium protein PduP pduP TR:Q9XDN1 (EMBL:AF026270) (464 aa) fasta scores: E(): 0, 99.1% id in 464 aa and Salmonella typhimurium ethanolamine utilization protein EutE eutE SW:EUTE_SALTY (P41793) (467 aa) fasta scores: E(): 0, 45.7% id in 473 aa; Paralogue of E. coli eutE (EUTE_ECOLI); Fasta hit to EUTE_ECOLI (467 aa), 45% identity in 470 aa overlap. (464 aa) |
| | pduQ | Putative propanol dehydrogenase; Similar to Salmonella enterica serovar Typhimurium protein PduQ pduQ TR:Q9XDN0 (EMBL:AF026270) (370 aa) fasta scores: E(): 0, 97.8% id in 370 aa and Clostridium acetobutylicum NADPH-dependent butanol dehydrogenase adh1 SW:ADH1_CLOAB (P13604) (388 aa) fasta scores: E(): 7e-32, 35.6% id in 385 aa; Fasta hit to EUTG_ECOLI (395 aa), 38% identity in 380 aa overlap; Fasta hit to FUCO_ECOLI (383 aa), 32% identity in 383 aa overlap; Paralogue of E. coli yiaY (ADH2_ECOLI); Fasta hit to ADH2_ECOLI (383 aa), 37% identity in 346 aa overlap. (370 aa) |
| | pduS | Putative ferredoxin; Similar to Salmonella enterica serovar Typhimurium protein PduS pduS TR:Q9XDM9 (EMBL:AF026270) (451 aa) fasta scores: E(): 0, 97.7% id in 442 aa and Clostridium sticklandii electron transfer protein from the D-proline reductase cluster prdC TR:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 1.5e-24, 32.3% id in 337 aa. The N-terminus is truncated by 9 amino acids with respect to the Salmonella enterica homologue (by a stop codon). The putative start codon indicated here is at codon 10 of the Salmonella enterica homologue. (442 aa) |
| | pduT | Putative propanediol utilization protein PduT; Similar to Salmonella enterica serovar Typhimurium protein PduT pduT TR:Q9XDM8 (EMBL:AF026270) (184 aa) fasta scores: E(): 0, 98.9% id in 184 aa and to part of Salmonella typhimurium ethanolamine utilization protein EutM precursor eutM or cchA SW:EUTM_SALTY (P41791) (96 aa) fasta scores: E(): 0.00067, 40.0% id in 80 aa. The Salmonella enterica homologue has been implicated in polyhedral body formation which may protect the cell from toxic metabolites, or protect the dehydratase from oxygen. (184 aa) |
| | STY2260 | Identical to Salmonella typhimurium propanediol utilization protein pduU SW:PDUU_SALTY (Q9XDM7) (116 aa) fasta scores: E(): 0, 100.0% id in 116 aa and Salmonella typhimurium ethanolamine utilization protein eutS SW:EUTS_SALTY (P76557) (111 aa) fasta scores: E(): 3.4e-22, 57.8% id in 109 aa. The Salmonella enterica homologue has been implicated in polyhedral body formation which may protect the cell from toxic metabolites, or protect the dehydratase from oxygen. (116 aa) |
| | pduV | Similar to Salmonella typhimurium propanediol utilization protein pduV SW:PDUV_SALTY (Q9XDM6) (150 aa) fasta scores: E(): 0, 97.3% id in 150 aa and Salmonella typhimurium ethanolamine utilization protein eutP SW:EUTP_SALTY (Q9ZFV6) (159 aa) fasta scores: E(): 2.7e-08, 32.2% id in 143 aa; Belongs to the EutP/PduV family. (150 aa) |
| | STY2372 | Putative hydrolase; Shows weak similarity to Listeria monocytogenes ADP ribosyl glycohydrolase bvrC TR:Q9RLU1 (EMBL:AJ007877) (327 aa) fasta scores: E(): 3.3e-30, 33.5% id in 325 aa; Orthologue of E. coli YEGU_ECOLI; Fasta hit to YEGU_ECOLI (334 aa), 84% identity in 334 aa overlap. (334 aa) |
| | STY2461 | 50s ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (94 aa) |
| | eutK | Similar to Escherichia coli ethanolamine utilization protein EutK precursor eutK SW:EUTK_ECOLI (P76540) (166 aa) fasta scores: E(): 0, 79.9% id in 164 aa and Salmonella typhimurium ethanolamine utilization protein EutK precursor eutK SW:EUTK_SALTY (Q9ZFU8) (164 aa) fasta scores: E(): 0, 97.6% id in 164 aa. The N-terminal approx 100 aa is similar to Salmonella typhimurium propanediol utilization protein PduA which has been implicated in polyhedral body formation which may protect the cell from toxic metabolites. (164 aa) |
| | eutL | Ethanolamine utilization protein EutL; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; Belongs to the EutL/PduB family. (219 aa) |
| | eutC | Similar to Salmonella typhimurium ethanolamine ammonia-lyase light chain eutC SW:EUTC_SALTY (P19265) (298 aa) fasta scores: E(): 0, 99.3% id in 298 aa; Orthologue of E. coli eutC (EUTC_ECOLI); Fasta hit to EUTC_ECOLI (295 aa), 91% identity in 298 aa overlap; Belongs to the EutC family. (298 aa) |
| | eutB | Similar to Salmonella typhimurium ethanolamine ammonia-lyase heavy chain SW:EUTB_SALTY (P19264) (453 aa) fasta scores: E(): 0, 99.8% id in 453 aa; Orthologue of E. coli eutB (EUTB_ECOLI); Fasta hit to EUTB_ECOLI (453 aa), 98% identity in 453 aa overlap. (453 aa) |
| | eutA | Similar to Salmonella typhimurium ethanolamine utilization protein EutA eutA SW:EUTA_SALTY (Q9ZFV2) (467 aa) fasta scores: E(): 0, 99.1% id in 467 aa; Orthologue of E. coli EUTA_ECOLI; Fasta hit to EUTA_ECOLI (467 aa), 90% identity in 467 aa overlap. Shares a region of similarity with EutJ and DnaK/FtsA. (467 aa) |
| | eutG | Putative alchohol dehydrogenase; Similar to Escherichia coli ethanolamine utilization protein EutG eutG SW:EUTG_ECOLI (P76553) (395 aa) fasta scores: E(): 0, 86.0% id in 394 aa and Salmonella typhimurium ethanolamine utilization protein EutG eutG SW:EUTG_SALTY (P41795) (391 aa) fasta scores: E(): 0, 93.4% id in 395 aa. (395 aa) |
| | STY2700 | Putative aldehyde dehydrogenase; Similar to Salmonella typhimurium ethanolamine utilization protein EutE eutE SW:EUTE_SALTY (P41793) (467 aa) fasta scores: E(): 0, 99.4% id in 467 aa; Orthologue of E. coli eutE (EUTE_ECOLI); Fasta hit to EUTE_ECOLI (467 aa), 94% identity in 467 aa overlap. (467 aa) |
| | eutN | Identical, at the C-terminus, to Salmonella typhimurium ethanolamine utilization protein EutN eutN or cchB SW:EUTN_SALTY (P41792) (99 aa) fasta scores: E(): 0, 100.0% id in 99 aa. Similar, at the C-terminus, to Escherichia coli ethanolamine utilization protein EutN eutN SW:EUTN_ECOLI (P77633) (95 aa) fasta scores: E(): 1.4e-31, 91.6% id in 95 aa. (229 aa) |
| | STY2703 | Putative cobalamin adenosyltransferase; Similar to Salmonella typhimurium ethanolamine utilization cobalamin adenosyltransferase SW:EUTT_SALTY (Q9ZFV4) (267 aa) fasta scores: E(): 0, 98.9% id in 267 aa; Orthologue of E. coli EUTT_ECOLI; Fasta hit to EUTT_ECOLI (267 aa), 88% identity in 265 aa overlap. (265 aa) |
| | STY2704 | Similar to Salmonella typhimurium LT2 ethanolamine utilization protein EutQ eutQ SW:EUTQ_SALTY (Q9ZFV5) (229 aa) fasta scores: E(): 0, 99.1% id in 229 aa; Orthologue of E. coli EUTQ_ECOLI; Fasta hit to EUTQ_ECOLI (233 aa), 87% identity in 233 aa overlap. (229 aa) |
| | STY2705 | Similar to Salmonella typhimurium LT2 ethanolamine utilization protein EutP eutP SW:EUTP_SALTY (Q9ZFV6) (159 aa) fasta scores: E(): 0, 100.0% id in 159 aa and to Salmonella typhimurium propanediol utilization protein PduV pduV SW:PDUV_SALTY (Q9XDM6) (150 aa) fasta scores: E(): 4.1e-07, 30.1% id in 143 aa; Orthologue of E. coli EUTP_ECOLI; Fasta hit to EUTP_ECOLI (159 aa), 85% identity in 159 aa overlap. (159 aa) |
| | eutS | Putative ethanolamine utilization protein EutS; May be involved in the formation of a specific microcompartment in the cell in which the metabolism of potentially toxic by-products takes place; Belongs to the EutS/PduU family. (111 aa) |
| | STY2737 | Conserved hypothetical protein; Mediates the interaction of DNA replication initiator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinitiation, a process called regulatory inhibition of DnaA or RIDA (By similarity); Belongs to the DnaA family. HdA subfamily. (241 aa) |
| | STY2752 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (490 aa) |
| | STY2781 | SseB protein; Orthologue of E. coli sseB (SSEB_ECOLI); Fasta hit to SSEB_ECOLI (261 aa), 89% identity in 261 aa overlap. (261 aa) |
| | STY2825 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. Belongs to the RecO family. (242 aa) |
| | STY2853 | Putative sigma(54) modulation protein; Fasta hit to RP5M_ECOLI (95 aa), 40% identity in 96 aa overlap; Orthologue of E. coli yfiA (YFIA_ECOLI); Fasta hit to YFIA_ECOLI (112 aa), 92% identity in 111 aa overlap. (112 aa) |
| | STY2860 | 50S ribosomal subunit protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (115 aa) |
| | STY2863 | 30S ribosomal subunit protein S16; In addition to being a ribosomal protein, S16 also has a cation-dependent endonuclease activity. (82 aa) |
| | STY2870 | DNA repair protein; May be involved in recombinational repair of damaged DNA. (553 aa) |
| | spaT | Unknown function; Type III secretion-associated chaperone required for SipB and SipC stabilization. Prevents premature association of SipB with SipC, which may lead to their targeting for degradation. Along with InvF, required for transcription activation of sigDE (sopB pipC), sicAsipBCDA, and sopE (By similarity). (165 aa) |
| | STY3230 | Putative membrane protein; Similar to Lactococcus lactis hypothetical 21.5 kDa protein TR:Q9WW92 (EMBL:AF036485) (200 aa) fasta scores: E(): 1.9e-15, 30.5% id in 187 aa. Contains possible membrane spanning hydrophobic domains. (192 aa) |
| | STY3388 | 30S ribosomal subunit protein S21; Orthologue of E. coli rpsU (RS21_ECOLI); Fasta hit to RS21_ECOLI (70 aa), 100% identity in 70 aa overlap; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
| | STY3389 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (581 aa) |
| | STY3449 | Probable phosphoheptose isomerase; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily. (196 aa) |
| | STY3464 | 30S ribosomal subunit protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | STY3467 | Protein chain initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (892 aa) |
| | STY3482 | 50S ribosomal subunit protein L27; Orthologue of E. coli rpmA (RL27_ECOLI); Fasta hit to RL27_ECOLI (84 aa), 95% identity in 84 aa overlap; Belongs to the bacterial ribosomal protein bL27 family. (85 aa) |
| | STY3483 | 50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | STY3522 | Stringent starvation protein B; Orthologue of E. coli sspB (SSPB_ECOLI); Fasta hit to SSPB_ECOLI (165 aa), 89% identity in 167 aa overlap. (166 aa) |
| | STY3524 | 30S ribosomal subunit protein S9; Orthologue of E. coli rpsI (RS9_ECOLI); Fasta hit to RS9_ECOLI (129 aa), 99% identity in 129 aa overlap; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | STY3525 | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (142 aa) |
| | rnG | Ribonuclease G; Similar to Escherichia coli ribonuclease G cafA r rnG SW:RNG_ECOLI (P25537; P76677) (488 aa) fasta scores: E(): 0, 96.7% id in 488 aa. (489 aa) |
| | mreB | Rod shape-determining protein; Forms membrane-associated dynamic filaments that are essential for cell shape determination. Acts by regulating cell wall synthesis and cell elongation, and thus cell shape. A feedback loop between cell geometry and MreB localization may maintain elongated cell shape by targeting cell wall growth to regions of negative cell wall curvature. (347 aa) |
| | STY3565 | Fis DNA-binding protein; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (98 aa) |
| | STY3566 | Putative adenine-specific DNA-modification methylase; Orthologue of E. coli yhdJ (YHDJ_ECOLI); Fasta hit to YHDJ_ECOLI (294 aa), 80% identity in 283 aa overlap; Belongs to the N(4)/N(6)-methyltransferase family. (294 aa) |
| | recQ | Similar to Escherichia coli ATP-dependent DNA helicase RecQ SW:RECQ_ECOLI (P15043; P76762) (607 aa) fasta scores: E(): 0, 94.6% id in 608 aa. (609 aa) |
| | STY3642 | ATP-dependent DNA helicase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. (674 aa) |
| | STY3666 | Similar to proteins of unknown function from several bacteriophage including: Bacteriophage 186 hypothetical protein SW:CP80_BP186 (P41059) (75 aa) fasta scores: E(): 2.9e-19, 68.0% id in 75 aa, and to Bacteriophage P2 hypothetical protein SW:YO82_BPP2 (Q06424) (74 aa) fasta scores: E(): 1.2e-10, 47.1% id in 70 aa. Also similar to Escherichia coli TraR protein SW:TRAR_ECOLI (P41065) (73 aa) fasta scores: E(): 3.8e-06, 38.9% id in 72 aa. Four cysteines postulated to be required for zinc binding in TraR are conserved. (75 aa) |
| | STY3715 | Histone like DNA-binding protein HU-alpha (NS2) (HU-2); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions; Belongs to the bacterial histone-like protein family. (90 aa) |
| | STY3733 | 50S ribosomal subunit protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation. (121 aa) |
| | STY3734 | 50S ribosomal subunit protein L10; Protein L10 is also a translational repressor protein. It controls the translation of the rplJL-rpoBC operon by binding to its mRNA (By similarity); Belongs to the universal ribosomal protein uL10 family. (165 aa) |
| | STY3735 | 50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (234 aa) |
| | STY3736 | 50S ribosomal subunit protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
| | STY3774 | 50S ribosomal protein L31; Binds the 23S rRNA. (70 aa) |
| | STY3775 | Primosomal protein replication factor; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (732 aa) |
| | STY3803 | Hypothetical protein; Weakly similar to several including: Escherichia coli hypothetical 35.6 kDa protein YegU SW:YEGU_ECOLI (P76418) (334 aa) fasta scores: E(): 3e-12, 31.4% id in 344 aa, and to Listeria monocytogenes ADP ribosyl glycohydrolase BvrC TR:Q9RLU1 (EMBL:AJ007877) (327 aa) fasta scores: E(): 3.5e-10, 27.7% id in 343 aa. (346 aa) |
| | STY3846 | Putative lipase; Similar to several including: Pseudomonas sp. lipase LipP TR:O52270 (EMBL:AF034088) (308 aa) fasta scores: E(): 1.8e-30, 38.4% id in 310 aa; Paralogue of E. coli ybaC (AES_ECOLI); Fasta hit to AES_ECOLI (319 aa), 31% identity in 261 aa overlap. (309 aa) |
| | STY3850 | Conserved hypothetical protein; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | rpmH | Similar to Escherichia coli 50s ribosomal protein l34 RpmH SW:RL34_ECOLI (P02437) (46 aa) fasta scores: E(): 1.5e-19, 100.0% id in 46 aa; Belongs to the bacterial ribosomal protein bL34 family. (46 aa) |
| | STY3940 | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (466 aa) |
| | STY3942 | recF protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). (357 aa) |
| | STY4062 | Putative TetR-family transcriptional regulator; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (198 aa) |
| | radC | Similar to Escherichia coli DNA repair protein RadC radC SW:RADC_ECOLI (P25531) (222 aa) fasta scores: E(): 0, 83.7% id in 215 aa, and to Haemophilus influenzae DNA repair protein SW:RADC_HAEIN (P44952) (234 aa) fasta scores: E(): 0, 51.2% id in 217 aa; Belongs to the UPF0758 family. YicR subfamily. (221 aa) |
| | STY4066 | 50S ribosomal subunit protein L28; Orthologue of E. coli rpmB (RL28_ECOLI); Fasta hit to RL28_ECOLI (77 aa), 96% identity in 77 aa overlap; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | STY4067 | 50S ribosomal subunit protein L33; Orthologue of E. coli rpmG (RL33_ECOLI); Fasta hit to RL33_ECOLI (54 aa), 100% identity in 54 aa overlap; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | STY4224 | Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YhiH SW:YHIH_ECOLI (P37624) (894 aa) fasta scores: E(): 0, 89.3% id in 896 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YbhF SW:YBHF_ECOLI (P75776) (578 aa) fasta scores: E(): 0, 35.9% id in 574 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein. (913 aa) |
| | rpsL | 30S ribosomal subunit protein S12; With S4 and S5 plays an important role in translational accuracy. (124 aa) |
| | rpsG | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsJ | 30S ribosomal subunit protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rplC | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (209 aa) |
| | rplD | 50S ribosomal subunit protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. Forms part of the polypeptide exit tunnel. Belongs to the universal ribosomal protein uL4 family. (201 aa) |
| | rplW | 50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (100 aa) |
| | rplB | 50S ribosomal subunit protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa) |
| | rpsS | 30S ribosomal subunit protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplV | 50S ribosomal subunit protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (110 aa) |
| | rpsC | 30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (By similarity). Belongs to the universal ribosomal protein uS3 family. (233 aa) |
| | rplP | 50S ribosomal subunit protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa) |
| | rpmC | 50S ribosomal subunit protein L29; Orthologue of E. coli rpmC (RL29_ECOLI); Fasta hit to RL29_ECOLI (63 aa), 98% identity in 63 aa overlap; Belongs to the universal ribosomal protein uL29 family. (63 aa) |
| | rpsQ | 30S ribosomal subunit protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (84 aa) |
| | rplN | 50S ribosomal subunit protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (123 aa) |
| | rplX | 50S ribosomal subunit protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (104 aa) |
| | rplE | 50S ribosomal subunit protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rpsN | 30S ribosomal subunit protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rpsH | 30S ribosomal subunit protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rplF | 50S ribosomal subunit protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rplR | 50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (117 aa) |
| | rpsE | 30S ribosomal subunit protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (167 aa) |
| | rpmD | 50S ribosomal subunit protein L30; Orthologue of E. coli rpmD (RL30_ECOLI); Fasta hit to RL30_ECOLI (58 aa), 97% identity in 58 aa overlap. (59 aa) |
| | rplO | 50S ribosomal subunit protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | rpmJ | 50S ribosomal subunit protein L36; Orthologue of E. coli rpmJ (RL36_ECOLI); Fasta hit to RL36_ECOLI (38 aa), 100% identity in 38 aa overlap; Belongs to the bacterial ribosomal protein bL36 family. (38 aa) |
| | rpsM | 30S ribosomal subunit protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa) |
| | rpsK | 30S ribosomal subunit protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rpsD | 30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | rplQ | 50S ribosomal subunit protein L17; Orthologue of E. coli rplQ (RL17_ECOLI); Fasta hit to RL17_ECOLI (127 aa), 99% identity in 127 aa overlap. (127 aa) |
| | yrdD | Conserved hypothetical protein; Orthologue of E. coli yrdD (YRDD_ECOLI); Fasta hit to YRDD_ECOLI (169 aa), 80% identity in 167 aa overlap. It also shows some smilarity to the C-terminus of some bacterial topoisomerase I. (180 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. (471 aa) |
| | STY4522 | DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (454 aa) |
| | STY4561 | Putative membrane protein; Weakly similar to Salmonella typhimurium plasmid pKM101 hypothetical protein TR:O06957 (EMBL:AF000360) (213 aa) fasta scores: E(): 1.4e-27, 48.2% id in 170 aa. Contains a hydrophobic region at the N-terminus. (189 aa) |
| | STY4638 | Similar to Bacteriophage P2 hypothetical 8.2 kDa protein in gpa 5'region orf82 SW:YO82_BPP2 (Q06424) (74 aa) fasta scores: E(): 5.3e-10, 47.1% id in 70 aa and bacteriophage 186 hypothetical 8.5 kDa protein CP80 SW:CP80_BP186 (P41059) (75 aa) fasta scores: E(): 1.6e-19, 69.3% id in 75 aa. Also similar to Escherichia coli TraR zinc finger protein SW:TRAR_ECOLI (P41065) (73 aa) fasta scores: E(): 1.1e-05, 38.9% id in 72 aa. Four cysteines postulated to be required for zinc binding in TraR are conserved. (75 aa) |
| | rpsF | 30s ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (131 aa) |
| | priB | Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS). During primosome assembly it facilitates the complex formation between PriA and DnaT; Belongs to the PriB family. (104 aa) |
| | rpsR | 30s ribosomal subunit protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | rplI | 50s ribosomal subunit protein L9; Binds to the 23S rRNA. (149 aa) |
| | STY4832 | Similar to Bacteriophage P4 putative P4-specific DNA primase alpha SW:PRIM_BPP4 (P10277) (777 aa) fasta scores: E(): 0, 86.2% id in 774 aa, and to Haemophilus influenzae phage phi-R73 primase-like protein TR:AAF27348 (EMBL:Q9L8P2) (589 aa) fasta scores: E(): 0, 37.5% id in 432 aa. (777 aa) |
| | mrr | Similar to Escherichia coli mrr restriction system protein Mrr SW:MRR_ECOLI (P24202) (304 aa) fasta scores: E(): 0, 77.3% id in 304 aa. (304 aa) |
| | dnaC | Similar to Escherichia coli DNA replication protein DnaC dnaC or dnaD SW:DNAC_ECOLI (P07905) (245 aa) fasta scores: E(): 0, 93.5% id in 245 aa. (245 aa) |
| | dnaT | Primosomal protein I; This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with DnaB protein and other prepriming proteins DnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'. (179 aa) |
| | STY1665 | Putative NADH reducing dehydrogenase; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Required to maintain the reduced state of SoxR; Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (673 aa) |
| | STY1622 | Similar to Haemophilus influenzae hypothetical protein Hi1508 SW:YF08_HAEIN (P44230) (141 aa) fasta scores: E(): 0.0041, 27.5% id in 102 aa. (148 aa) |
| | STY1495 | 30S ribosomal protein S22; Although this protein associates with the 30S subunit of the ribosome it is not considered to be a bona fide ribosomal protein. Belongs to the SRA family. (47 aa) |
| | STY1426 | Hypothetical protein; No significant database matches. (149 aa) |
| | STY1413 | Hypothetical protein; No significant database matches. (519 aa) |
| | cobB | Putative regulatory protein; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. (237 aa) |
| | STY1230 | 50S ribosomal protein L32; Orthologue of E. coli rpmF (RL32_ECOLI); Fasta hit to RL32_ECOLI (56 aa), 100% identity in 56 aa overlap; Belongs to the bacterial ribosomal protein bL32 family. (57 aa) |
| | pipD | Putative secreted peptidase; Similar to Salmonella dublin dipeptidase homolog PipD TR:O85304 (EMBL:AF060858) fasta scores: E(): 0, 94.3% id in 407 aa and to Lactobacillus helveticus dipeptidase PepD TR:Q48558 (EMBL:U34257) fasta scores: E(): 0, 28.9% id in 474 aa. (489 aa) |
| | STY1094 | Conserved hypothetical protein; Orthologue of E. coli YCCR_ECOLI; Fasta hit to YCCR_ECOLI (209 aa), 75% identity in 199 aa overlap. (201 aa) |
| | STY1090 | Conserved hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. (150 aa) |
| | STY1023 | Similar to several including: Escherichia coli DNA replication protein DnaC or DnaD SW:DNAC_ECOLI (P07905) (245 aa) fasta scores: E(): 0, 48.8% id in 244 aa, Streptococcus thermophilus bacteriophage 7201 Orf5 TR:AAF26604 (EMBL:AF145054) (260 aa) fasta scores: E(): 5.1e-06, 23.3% id in 193 aa and Salmonella typhimurium hypothetical 27.6 kda protein TR:O84893 (EMBL:AF001386) fasta scores: E(): 0, 100.0% id in 249 aa; Fasta hit to DNAC_ECOLI (245 aa), 49% identity in 244 aa overlap; Paralogue of E. coli P77546; Fasta hit to P77546 (248 aa), 55% identity in 249 aa overlap. (249 aa) |
| | STY1022 | Similar to the N-terminus of Bacteriophage phi-80 replication protein 15 SW:VG15_BPPH8 (P14815) fasta scores: E(): 8.6e-18, 36.6% id in 227 aa and to Salmonella typhimurium hypothetical 36.5 kda protein TR:O84892 (EMBL:AF001386) fasta scores: E(): 0, 99.7% id in 325 aa. (327 aa) |
| | STY0982 | Integration host factor beta-subunit (IHF-beta); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (94 aa) |
| | STY0981 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (557 aa) |
| | STY0960 | Conserevd hypothetical protein; Orthologue of E. coli ycaJ (YCAJ_ECOLI); Fasta hit to YCAJ_ECOLI (447 aa), 97% identity in 447 aa overlap. (447 aa) |
| | ybiI | Similar to Escherichia coli hypothetical 9.8 kDa protein in ding-glnq intergenic region ybiI SW:YBII_ECOLI (P41039) (88 aa) fasta scores: E(): 9.9e-31, 80.7% id in 88 aa, and to Escherichia coli Plasmid F TraR protein traR SW:TRAR_ECOLI (P41065) (73 aa) fasta scores: E(): 1.7e-06, 47.5% id in 61 aa; Orthologue of E. coli ybiI (YBII_ECOLI); Fasta hit to YBII_ECOLI (88 aa), 81% identity in 88 aa overlap. (88 aa) |
| | aes | Acetyl esterase; Displays esterase activity towards short chain fatty esters (acyl chain length of up to 8 carbons). Able to hydrolyze triacetylglycerol (triacetin) and tributyrylglycerol (tributyrin), but not trioleylglycerol (triolein) or cholesterol oleate. Negatively regulates MalT activity by antagonizing maltotriose binding. Inhibits MelA galactosidase activity. (323 aa) |
| | STY0530 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa) |
| | STY0529 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (109 aa) |
| | STY0513 | Similar to Guillardia theta chloroplast 50s ribosomal protein l36 rpl36 SW:RK36_GUITH (P28528; O46911) (48 aa) fasta scores: E(): 1.6e-09, 56.5% id in 46 aa, and to Rickettsia prowazekii 50s ribosomal protein l36 rpmj or rp456 SW:RL36_RICPR (Q9ZD87) (41 aa) fasta scores: E(): 4.9e-08, 56.1% id in 41 aa. (46 aa) |
| | rpmE2 | Putative 50s ribosomal protein L31 (second copy); Similar to Escherichia coli hypothetical 9.9 kDa protein in intf-eaeh intergenic region ykgM SW:YKGM_ECOLI (P71302) (87 aa) fasta scores: E(): 1.6e-27, 74.4% id in 86 aa, and to Listeria monocytogenes 50s ribosomal protein l31 rpmE SW:RL31_LISMO (Q9ZH28) (81 aa) fasta scores: E(): 7.9e-12, 48.1% id in 79 aa, and to Borrelia burgdorferi 50s ribosomal protein l31 rpme or bb0229 SW:RL31_BORBU (O51247) (81 aa) fasta scores: E(): 7.8e-11, 43.6% id in 78 aa; Fasta hit to RL31_ECOLI (70 aa), 33% identity in 84 aa overlap; Orthologue of E. coli [...] (86 aa) |
| | STY0493 | DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions; Belongs to the bacterial histone-like protein family. (90 aa) |
| | STY0239 | 30S ribosomal protein S2; Orthologue of E. coli rpsB (RS2_ECOLI); Fasta hit to RS2_ECOLI (240 aa), 98% identity in 240 aa overlap; Belongs to the universal ribosomal protein uS2 family. (241 aa) |
| | STY0052 | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa) |
