STRINGSTRING
APD83991.1 APD83991.1 AOS91474.2 AOS91474.2 APD84032.1 APD84032.1 APD84109.1 APD84109.1 APD84186.1 APD84186.1 AN480_16045 AN480_16045
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APD83991.1Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2130 aa)
AOS91474.23-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3084 aa)
APD84032.1Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (3677 aa)
APD84109.1Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (4184 aa)
APD84186.1Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2131 aa)
AN480_16045Non-ribosomal peptide synthetase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (2552 aa)
Your Current Organism:
Mycobacterium chimaera
NCBI taxonomy Id: 222805
Other names: CCUG 50989, CIP 107892, DSM 44623, JCM 14737, M. chimaera, Mycobacterium chimaera Tortoli et al. 2004, NCTC 13781, personal::FI-01069, strain FI-01069
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