Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQX10879.1 | AQX10903.1 | BBD35_00155 | BBD35_00275 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
| AQX10879.1 | AQX12644.1 | BBD35_00155 | BBD35_09790 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AQX10879.1 | AQX12924.1 | BBD35_00155 | BBD35_11340 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| AQX10879.1 | AQX13382.1 | BBD35_00155 | BBD35_13845 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |
| AQX10879.1 | AQX13383.1 | BBD35_00155 | BBD35_13850 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AQX10879.1 | AQX13586.1 | BBD35_00155 | BBD35_14935 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
| AQX10879.1 | AQX13814.1 | BBD35_00155 | BBD35_16185 | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family. | 0.965 |
| AQX10895.1 | AQX11955.1 | BBD35_00235 | BBD35_05990 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.630 |
| AQX10895.1 | AQX11985.1 | BBD35_00235 | BBD35_06160 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.510 |
| AQX10895.1 | secA | BBD35_00235 | BBD35_04935 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.982 |
| AQX10895.1 | secE | BBD35_00235 | BBD35_03310 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.993 |
| AQX10895.1 | secF | BBD35_00235 | BBD35_14315 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.997 |
| AQX10895.1 | secY | BBD35_00235 | BBD35_07105 | Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.985 |
| AQX10903.1 | AQX10879.1 | BBD35_00275 | BBD35_00155 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
| AQX10903.1 | AQX12644.1 | BBD35_00275 | BBD35_09790 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AQX10903.1 | AQX12924.1 | BBD35_00275 | BBD35_11340 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AQX10903.1 | AQX13382.1 | BBD35_00275 | BBD35_13845 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.630 |
| AQX10903.1 | AQX13383.1 | BBD35_00275 | BBD35_13850 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AQX10903.1 | AQX13586.1 | BBD35_00275 | BBD35_14935 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
| AQX10903.1 | AQX13814.1 | BBD35_00275 | BBD35_16185 | ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family. | 0.490 |
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