(7 nodes) Electron transport coupled proton transport network (Pseudomonas lutea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGF65036.1	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
	KGF64427.1	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
	KGF64426.1	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
	KGF66574.1	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (672 aa)
	KGF66572.1	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
	KGF65902.1	Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (480 aa)
	KGF65038.1	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (657 aa)

Your Current Organism:

Pseudomonas lutea

NCBI taxonomy Id: 243924
Other names: CECT 5822, LMG 21974, LMG:21974, P. lutea, Pseudomonas lutea Peix et al. 2004, strain OK2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGF64426.1	KGF64427.1	LT42_00070	LT42_00075	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KGF64426.1	KGF65036.1	LT42_00070	LT42_03510	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
KGF64426.1	KGF65038.1	LT42_00070	LT42_03520	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.994
KGF64426.1	KGF65902.1	LT42_00070	LT42_08325	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.663
KGF64426.1	KGF66572.1	LT42_00070	LT42_12015	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
KGF64426.1	KGF66574.1	LT42_00070	LT42_12025	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.994
KGF64427.1	KGF64426.1	LT42_00075	LT42_00070	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KGF64427.1	KGF65036.1	LT42_00075	LT42_03510	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
KGF64427.1	KGF65038.1	LT42_00075	LT42_03520	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.536
KGF64427.1	KGF65902.1	LT42_00075	LT42_08325	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.463
KGF64427.1	KGF66572.1	LT42_00075	LT42_12015	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
KGF64427.1	KGF66574.1	LT42_00075	LT42_12025	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.536
KGF65036.1	KGF64426.1	LT42_03510	LT42_00070	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
KGF65036.1	KGF64427.1	LT42_03510	LT42_00075	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
KGF65036.1	KGF65038.1	LT42_03510	LT42_03520	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.999
KGF65036.1	KGF65902.1	LT42_03510	LT42_08325	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.546
KGF65036.1	KGF66572.1	LT42_03510	LT42_12015	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
KGF65036.1	KGF66574.1	LT42_03510	LT42_12025	Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	0.999
KGF65038.1	KGF64426.1	LT42_03520	LT42_00070	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KGF65038.1	KGF64427.1	LT42_03520	LT42_00075	Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.	NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536