STRINGSTRING
CIMG02180-2 CIMG02180-2 CIMG01044 CIMG01044 CIMG_04653 CIMG_04653 CIMG_11166 CIMG_11166 CIMG06451-2 CIMG06451-2 CIMG08987-2 CIMG08987-2 CIMG_12346 CIMG_12346 CIMG_09165 CIMG_09165 CIMG_06535 CIMG_06535 CIMG_06396 CIMG_06396 CIMG_00437 CIMG_00437 CIMG_00939 CIMG_00939 CIMG_01380 CIMG_01380 CIMG_12274 CIMG_12274 CIMG_10227 CIMG_10227 CIMG_10310 CIMG_10310 CIMG_09069 CIMG_09069 CIMG_09075 CIMG_09075 CIMG_09202 CIMG_09202 CIMG_09295 CIMG_09295 CIMG_09586 CIMG_09586 CIMG_07750 CIMG_07750 CIMG_08166 CIMG_08166 CIMG_08908 CIMG_08908 CIMG_06140 CIMG_06140 CIMG_06339 CIMG_06339 CIMG_06780 CIMG_06780 CIMG_07275 CIMG_07275 CIMG_03379 CIMG_03379 CIMG_03619 CIMG_03619 CIMG_03896 CIMG_03896 CIMG_04119 CIMG_04119 CIMG_04293 CIMG_04293 CIMG_04573 CIMG_04573 CIMG_04973 CIMG_04973 CIMG_05001 CIMG_05001 CIMG_00256 CIMG_00256 CIMG_00259 CIMG_00259 CIMG_00680 CIMG_00680 CIMG_00987 CIMG_00987 CIMG_00993 CIMG_00993 CIMG_01039 CIMG_01039 CIMG_01605 CIMG_01605 CIMG_02199 CIMG_02199 CIMG_02263 CIMG_02263 CIMG_02280 CIMG_02280 CIMG_02600 CIMG_02600 CIMG_02648 CIMG_02648 PRP5 PRP5 PRP28 PRP28
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CIMG02180-2Pre-mRNA splicing helicase. (2213 aa)
CIMG01044Anaphase-promoting complex subunit 2. (194 aa)
CIMG_04653U2 snRNP component HSH155, variant. (1228 aa)
CIMG_11166FHA domain-containing protein SNIP1. (323 aa)
CIMG06451-2Splicing factor 3a subunit 3. (501 aa)
CIMG08987-2Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
CIMG_12346PHD finger-like domain-containing protein 5B. (110 aa)
CIMG_09165Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (769 aa)
CIMG_06535CID domain-containing protein. (596 aa)
CIMG_06396Peptidyl-prolyl isomerase cwc27. (574 aa)
CIMG_00437Pre-mRNA splicing factor. (580 aa)
CIMG_00939mRNA splicing factor RNA helicase. (1106 aa)
CIMG_01380Tudor domain-containing protein. (296 aa)
CIMG_12274Uncharacterized protein. (412 aa)
CIMG_10227Pre-mRNA-splicing factor rse1. (1209 aa)
CIMG_10310Pre-mRNA splicing factor. (609 aa)
CIMG_09069Small nuclear ribonucleoprotein Sm D3. (116 aa)
CIMG_09075DNA binding protein SART-1. (684 aa)
CIMG_09202U1 small nuclear ribonucleoprotein. (251 aa)
CIMG_09295Small nuclear ribonucleoprotein Sm D2. (114 aa)
CIMG_09586Small nuclear ribonucleoprotein B and B. (223 aa)
CIMG_07750U5 snRNP complex subunit. (362 aa)
CIMG_08166Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
CIMG_08908Pre-mRNA-splicing factor cwc26. (310 aa)
CIMG_06140Pre-mRNA-splicing factor cwc24. (335 aa)
CIMG_06339Splicing factor 3b. (587 aa)
CIMG_06780U2 snRNP component IST3. (269 aa)
CIMG_07275RNA binding domain-containing protein. (182 aa)
CIMG_03379U4/U6 small nuclear ribonucleoprotein. (592 aa)
CIMG_03619U2-associated protein SR140. (816 aa)
CIMG_03896Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
CIMG_04119G-patch DNA repair protein. (528 aa)
CIMG_04293Small nuclear ribonucleoprotein G. (78 aa)
CIMG_04573Pre-mRNA-processing-splicing factor 8. (2354 aa)
CIMG_04973F-box domain-containing protein. (623 aa)
CIMG_05001Uncharacterized protein. (1312 aa)
CIMG_00256Small nuclear ribonucleoprotein SmF. (89 aa)
CIMG_00259Uncharacterized protein. (158 aa)
CIMG_00680U2 small nuclear ribonucleoprotein A. (256 aa)
CIMG_00987Pre-mRNA splicing factor. (940 aa)
CIMG_00993Pre-mRNA branch site protein p14. (115 aa)
CIMG_01039Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (120 aa)
CIMG_01605Splicing factor 3a subunit 2. (239 aa)
CIMG_02199Pre-mRNA splicing factor. (541 aa)
CIMG_02263Small GTP-binding protein. (987 aa)
CIMG_02280Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (183 aa)
CIMG_02600Splicing factor 3b subunit 4. (347 aa)
CIMG_02648Uncharacterized protein. (251 aa)
PRP5Pre-mRNA-processing ATP-dependent RNA helicase PRP5; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity); Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily. (1197 aa)
PRP28Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity). (820 aa)
Your Current Organism:
Coccidioides immitis RS
NCBI taxonomy Id: 246410
Other names: C. immitis RS
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