STRINGSTRING
cpcC cpcC glr1180 glr1180 apcD apcD glr1182 glr1182 cpcB cpcB cpcA cpcA cpeZ cpeZ cpeY cpeY cpeA cpeA cpeB cpeB ycf58 ycf58 cpeS cpeS cpeT cpeT apcE apcE apcA apcA apcB apcB apcC apcC gll1254 gll1254 gll1255 gll1255 nblB-2 nblB-2 glr1259 glr1259 pebA pebA pebB pebB glr1262 glr1262 cpeC cpeC cpeD cpeD cpeE cpeE cpcD cpcD cpcD-2 cpcD-2 cpcE cpcE cpcF cpcF glr1614 glr1614 apcF apcF cpcB-2 cpcB-2 cpcA-2 cpcA-2 cpcC-2 cpcC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpcCPhycocyanin-associated rod linker protein; ORF_ID:glr0950; Belongs to the phycobilisome linker protein family. (219 aa)
glr1180ORF_ID:glr1180; hypothetical protein. (392 aa)
apcDallophycocyanin-B; ORF_ID:glr1181. (161 aa)
glr1182Chromophore lyase CpcT/CpeT 2; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (202 aa)
cpcBPhycocyanin beta chain; ORF_ID:glr1184. (172 aa)
cpcAPhycocyanin alpha chain; ORF_ID:glr1185. (162 aa)
cpeZCpeZ protein; ORF_ID:gll1187; putative phycoerythrin lyase subunit. (204 aa)
cpeYCpeY protein; ORF_ID:gll1188; putative phycoerythrin lyase subunit. (428 aa)
cpeAPhycoerythrin alpha chain; ORF_ID:gll1189. (164 aa)
cpeBPhycoerythrin beta subunit; ORF_ID:gll1190. (177 aa)
ycf58Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (201 aa)
cpeSChromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (180 aa)
cpeTChromophore lyase CpcT/CpeT 3; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (203 aa)
apcEPhycobilisome core-membrane linker protein; ORF_ID:glr1245; Belongs to the phycobilisome linker protein family. (1155 aa)
apcAAllophycocyanin alpha subunit; ORF_ID:glr1246. (161 aa)
apcBAllophycocyanin beta subunit; ORF_ID:glr1247. (161 aa)
apcCPhycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (69 aa)
gll1254ORF_ID:gll1254; similar to allophycocyanin alpha chain. (194 aa)
gll1255ORF_ID:gll1255; bilin biosynthesis protein MpeU homolog. (290 aa)
nblB-2NblB protein; ORF_ID:glr1257; phycocyanin alpha phycocyanobilin lyase related protein NblB homolog. (217 aa)
glr1259Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (197 aa)
pebA15,16-dihydrobiliverdin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family. (267 aa)
pebBPhycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family. (245 aa)
glr1262ORF_ID:glr1262; putative phycobiliprotein linker; Belongs to the phycobilisome linker protein family. (824 aa)
cpeCPhycoerythrin-associated linker protein; ORF_ID:glr1263; Belongs to the phycobilisome linker protein family. (285 aa)
cpeDPhycoerythrin-associated linker protein; ORF_ID:glr1264; Belongs to the phycobilisome linker protein family. (255 aa)
cpeEPhycoerythrin-associated linker protein; ORF_ID:glr1265; Belongs to the phycobilisome linker protein family. (254 aa)
cpcDCpcD protein; ORF_ID:gsr1266; phycobilisome 8.9 KD linker polypeptide, phycocyanin-associated, rod (rod capping linker protein). (76 aa)
cpcD-2CpcD protein. (70 aa)
cpcEPhycocyanobilin lyase alpha subunit; ORF_ID:glr1268. (247 aa)
cpcFPhycocyanobilin lyase alpha subunit; ORF_ID:glr1269. (193 aa)
glr1614Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (212 aa)
apcFPhycobilisome core component; ORF_ID:glr1930. (161 aa)
cpcB-2Phycocyanin beta chain; ORF_ID:glr3217. (172 aa)
cpcA-2Phycocyanin alpha chain; ORF_ID:glr3218. (162 aa)
cpcC-2Phycocyanin-associated rod linker protein; ORF_ID:gll3219; Belongs to the phycobilisome linker protein family. (219 aa)
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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