STRINGSTRING
cpcC cpcC cpcB cpcB cpcA cpcA cpcD-2 cpcD-2 cpcE cpcE cpcF cpcF cpcC-2 cpcC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpcCPhycocyanin-associated rod linker protein; ORF_ID:glr0950; Belongs to the phycobilisome linker protein family. (219 aa)
cpcBPhycocyanin beta chain; ORF_ID:glr1184. (172 aa)
cpcAPhycocyanin alpha chain; ORF_ID:glr1185. (162 aa)
cpcD-2CpcD protein. (70 aa)
cpcEPhycocyanobilin lyase alpha subunit; ORF_ID:glr1268. (247 aa)
cpcFPhycocyanobilin lyase alpha subunit; ORF_ID:glr1269. (193 aa)
cpcC-2Phycocyanin-associated rod linker protein; ORF_ID:gll3219; Belongs to the phycobilisome linker protein family. (219 aa)
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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