(36 nodes) ABC transporter-like, conserved site network (Alicyclobacillus vulcanalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SIS52902.1	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (328 aa)
	SIS52927.1	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (318 aa)
	SIS57530.1	ATP-binding cassette, subfamily B. (589 aa)
	SIS57553.1	ATP-binding cassette, subfamily B. (610 aa)
	SIS57664.1	Monosaccharide ABC transporter ATP-binding protein, CUT2 family. (495 aa)
	SIS57944.1	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (321 aa)
	SIS57968.1	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (322 aa)
	SIS50016.1	Zinc/manganese transport system ATP-binding protein. (273 aa)
	SIS58929.1	Putative ABC transport system ATP-binding protein. (228 aa)
	SIS65123.1	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (324 aa)
	SIS65142.1	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (331 aa)
	pstB	Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (250 aa)
	SIS65844.1	ATP-binding cassette, subfamily C, CydC/ATP-binding cassette, subfamily C, CydCD. (631 aa)
	SIS65860.1	ATP-binding cassette, subfamily C, CydD. (583 aa)
	SIS65969.1	Iron complex transport system ATP-binding protein. (257 aa)
	SIS73997.1	Amino acid ABC transporter ATP-binding protein, PAAT family; Belongs to the ABC transporter superfamily. (241 aa)
	SIS79662.1	Energy-coupling factor transport system ATP-binding protein. (764 aa)
	SIS80900.1	Iron complex transport system ATP-binding protein. (279 aa)
	SIS81304.1	ATP-binding cassette, subfamily B. (640 aa)
	SIS81319.1	ATP-binding cassette, subfamily B. (577 aa)
	SIS81368.1	ATP-binding cassette, subfamily B. (678 aa)
	SIS81381.1	ATP-binding cassette, subfamily B. (625 aa)
	SIS79038.1	Fe-S cluster assembly ATP-binding protein. (261 aa)
	SIS83331.1	Nucleoside ABC transporter ATP-binding protein. (506 aa)
	SIS83434.1	iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (358 aa)
	SIS83507.1	ABC-2 type transport system ATP-binding protein. (336 aa)
	SIT04191.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family. (200 aa)
	ftsE	Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (228 aa)
	uvrA	Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (957 aa)
	SIT03503.1	ABC-2 type transport system ATP-binding protein. (306 aa)
	SIT03607.1	ABC-2 type transport system ATP-binding protein. (307 aa)
	SIT05668.1	ATP-binding cassette, subfamily F, member 3. (658 aa)
	SIT05755.1	Monosaccharide ABC transporter ATP-binding protein, CUT2 family. (500 aa)
	SIT07557.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (384 aa)
	SIT09455.1	Putative ABC transport system ATP-binding protein. (239 aa)
	SIT12174.1	iron(III) transport system ATP-binding protein/energy-coupling factor transport system ATP-binding protein. (315 aa)

Your Current Organism:

Alicyclobacillus vulcanalis

NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SIS50016.1	SIS58929.1	SAMN05421799_10145	SAMN05421799_101457	Zinc/manganese transport system ATP-binding protein.	Putative ABC transport system ATP-binding protein.	0.418
SIS50016.1	SIS65969.1	SAMN05421799_10145	SAMN05421799_102235	Zinc/manganese transport system ATP-binding protein.	Iron complex transport system ATP-binding protein.	0.448
SIS52902.1	SIS52927.1	SAMN05421799_101184	SAMN05421799_101185	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	0.797
SIS52902.1	SIS79662.1	SAMN05421799_101184	SAMN05421799_104132	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	Energy-coupling factor transport system ATP-binding protein.	0.719
SIS52902.1	SIT07557.1	SAMN05421799_101184	SAMN05421799_11256	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.631
SIS52927.1	SIS52902.1	SAMN05421799_101185	SAMN05421799_101184	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	0.797
SIS52927.1	SIS79662.1	SAMN05421799_101185	SAMN05421799_104132	Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.	Energy-coupling factor transport system ATP-binding protein.	0.722
SIS57530.1	SIS57553.1	SAMN05421799_101393	SAMN05421799_101394	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily B.	0.805
SIS57530.1	SIS65844.1	SAMN05421799_101393	SAMN05421799_102228	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily C, CydC/ATP-binding cassette, subfamily C, CydCD.	0.563
SIS57530.1	SIS65860.1	SAMN05421799_101393	SAMN05421799_102229	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily C, CydD.	0.523
SIS57530.1	SIS79662.1	SAMN05421799_101393	SAMN05421799_104132	ATP-binding cassette, subfamily B.	Energy-coupling factor transport system ATP-binding protein.	0.729
SIS57530.1	SIS81319.1	SAMN05421799_101393	SAMN05421799_104240	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily B.	0.407
SIS57530.1	SIS83507.1	SAMN05421799_101393	SAMN05421799_10532	ATP-binding cassette, subfamily B.	ABC-2 type transport system ATP-binding protein.	0.427
SIS57530.1	SIT03503.1	SAMN05421799_101393	SAMN05421799_11082	ATP-binding cassette, subfamily B.	ABC-2 type transport system ATP-binding protein.	0.482
SIS57530.1	SIT03607.1	SAMN05421799_101393	SAMN05421799_11091	ATP-binding cassette, subfamily B.	ABC-2 type transport system ATP-binding protein.	0.466
SIS57530.1	SIT12174.1	SAMN05421799_101393	SAMN05421799_11533	ATP-binding cassette, subfamily B.	iron(III) transport system ATP-binding protein/energy-coupling factor transport system ATP-binding protein.	0.450
SIS57553.1	SIS57530.1	SAMN05421799_101394	SAMN05421799_101393	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily B.	0.805
SIS57553.1	SIS65844.1	SAMN05421799_101394	SAMN05421799_102228	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily C, CydC/ATP-binding cassette, subfamily C, CydCD.	0.558
SIS57553.1	SIS65860.1	SAMN05421799_101394	SAMN05421799_102229	ATP-binding cassette, subfamily B.	ATP-binding cassette, subfamily C, CydD.	0.516
SIS57553.1	SIS79662.1	SAMN05421799_101394	SAMN05421799_104132	ATP-binding cassette, subfamily B.	Energy-coupling factor transport system ATP-binding protein.	0.729

page 1 of 10

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About