(5 nodes) RNA polymerase, and Transcription termination network (Pseudomonas xanthomarina)

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Your Input:
	rpoZ	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (87 aa)
	nusG	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. (177 aa)
	rpoB	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1356 aa)
	rpoC	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1399 aa)
	nusA	NusA antitermination factor; Participates in both transcription termination and antitermination. (493 aa)

Your Current Organism:

Pseudomonas xanthomarina

NCBI taxonomy Id: 271420
Other names: CCUG 46543, DSM 18231, JCM 12468, NRIC 0617, P. xanthomarina, Pseudomonas xanthomarina Romanenko et al. 2005

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nusA	nusG	SAMN05216535_1263	SAMN05216535_0896	NusA antitermination factor; Participates in both transcription termination and antitermination.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.990
nusA	rpoB	SAMN05216535_1263	SAMN05216535_0902	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
nusA	rpoC	SAMN05216535_1263	SAMN05216535_0903	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.992
nusA	rpoZ	SAMN05216535_1263	SAMN05216535_0684	NusA antitermination factor; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.964
nusG	nusA	SAMN05216535_0896	SAMN05216535_1263	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.990
nusG	rpoB	SAMN05216535_0896	SAMN05216535_0902	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
nusG	rpoC	SAMN05216535_0896	SAMN05216535_0903	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.987
nusG	rpoZ	SAMN05216535_0896	SAMN05216535_0684	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.935
rpoB	nusA	SAMN05216535_0902	SAMN05216535_1263	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.997
rpoB	nusG	SAMN05216535_0902	SAMN05216535_0896	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.996
rpoB	rpoC	SAMN05216535_0902	SAMN05216535_0903	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	SAMN05216535_0902	SAMN05216535_0684	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoC	nusA	SAMN05216535_0903	SAMN05216535_1263	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.992
rpoC	nusG	SAMN05216535_0903	SAMN05216535_0896	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.987
rpoC	rpoB	SAMN05216535_0903	SAMN05216535_0902	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoZ	SAMN05216535_0903	SAMN05216535_0684	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.994
rpoZ	nusA	SAMN05216535_0684	SAMN05216535_1263	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	NusA antitermination factor; Participates in both transcription termination and antitermination.	0.964
rpoZ	nusG	SAMN05216535_0684	SAMN05216535_0896	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.	0.935
rpoZ	rpoB	SAMN05216535_0684	SAMN05216535_0902	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoZ	rpoC	SAMN05216535_0684	SAMN05216535_0903	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994