STRINGSTRING
YALI0_F05962g YALI0_F05962g TEF TEF POX1 POX1 XPR2 XPR2 LEU2 LEU2 ICL1 ICL1 URA3 URA3 YALI0_F04095g YALI0_F04095g YALI0_E18634g YALI0_E18634g YALI0_E11869g YALI0_E11869g YALI0_C21648g YALI0_C21648g YALI0_A08426g YALI0_A08426g PAY32 PAY32
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YALI0_F05962gAcetyl-coenzyme A synthetase. (657 aa)
TEFElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (460 aa)
POX1Acyl-coenzyme A oxidase 1. (689 aa)
XPR2Alkaline extracellular protease; Major secreted protein that belongs to the subtilisin family serine proteases. (454 aa)
LEU23-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (405 aa)
ICL1Isocitrate lyase; Catalyzes the formation of succinate and glyoxylate from isocitrate, a key step of the glyoxylate cycle, which operates as an anaplerotic route for replenishing the tricarboxylic acid cycle. Required for growth on ethanol or acetate, but dispensable when fermentable carbon sources are available. Acts also on 2- methylisocitrate; Belongs to the isocitrate lyase/PEP mutase superfamily. Isocitrate lyase family. (540 aa)
URA3Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (286 aa)
YALI0_F04095gIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (416 aa)
YALI0_E18634gYALI0E18634p. (629 aa)
YALI0_E11869gDNA polymerase. (1375 aa)
YALI0_C21648gDNA polymerase. (1338 aa)
YALI0_A08426gDNA polymerase. (1072 aa)
PAY32Peroxisomal targeting signal receptor; Binds to the C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) and plays an essential role in peroxisomal protein import. (598 aa)
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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