STRINGSTRING
LOC107104615 LOC107104615 LOC107101357 LOC107101357 uba52 uba52 FBN1 FBN1 e2f4 e2f4 cgn cgn tgfb3 tgfb3 LOC107088435 LOC107088435 ENSCVAP00000031960 ENSCVAP00000031960 LOC107099242 LOC107099242 LOC107088457 LOC107088457 LOC107090159 LOC107090159 parp1 parp1 itgb3 itgb3 LOC107086814 LOC107086814 acvr2b acvr2b fst fst LOC107093036 LOC107093036 nedd4l nedd4l LOC107083715 LOC107083715 LOC107096611 LOC107096611 LOC107080995 LOC107080995 LOC107099535 LOC107099535 bambi bambi ltbp2 ltbp2 ncor2 ncor2 ENSCVAP00000027729 ENSCVAP00000027729 LOC107083535 LOC107083535 irx5 irx5 LOC107093694 LOC107093694 bmpr1a bmpr1a ENSCVAP00000007375 ENSCVAP00000007375 ENSCVAP00000007060 ENSCVAP00000007060 sp1 sp1 LOC107098322 LOC107098322 ENSCVAP00000005986 ENSCVAP00000005986 foxh1 foxh1 prkcz prkcz LOC107089350 LOC107089350 tgfb2 tgfb2 pard3 pard3 LOC107087707 LOC107087707 LOC107084459 LOC107084459 furin furin ENSCVAP00000003761 ENSCVAP00000003761 LOC107102488 LOC107102488 LOC107103699 LOC107103699 smad9 smad9 SMURF2 SMURF2 ccnt1 ccnt1 LOC107100064 LOC107100064 bmpr2 bmpr2 LOC107100676 LOC107100676 ENSCVAP00000009719 ENSCVAP00000009719 ENSCVAP00000009945 ENSCVAP00000009945 LOC107092654 LOC107092654 LOC107084752 LOC107084752 snw1 snw1 ccnk ccnk LTBP3 LTBP3 fkbp1b fkbp1b ccnq ccnq bmp2 bmp2 ENSCVAP00000011286 ENSCVAP00000011286 LOC107102949 LOC107102949 INHBB INHBB zfyve9 zfyve9 itgb8 itgb8 tfdp1 tfdp1 LOC107093506 LOC107093506 trim33 trim33 smad1 smad1 LOC107095805 LOC107095805 bmp10 bmp10 smad2 smad2 LOC107094587 LOC107094587 drap1 drap1 LOC107095752 LOC107095752 LOC107081990 LOC107081990 rbl1 rbl1 LOC107087195 LOC107087195 ENSCVAP00000002779 ENSCVAP00000002779 Ncor1 Ncor1 acvr1 acvr1 ACVR1C ACVR1C LOC107089450 LOC107089450 cdk9 cdk9 rps27a rps27a LOC107087093 LOC107087093 ENSCVAP00000012118 ENSCVAP00000012118 LOC107099467 LOC107099467 itgb6 itgb6 LOC107093738 LOC107093738 LOC107094847 LOC107094847 LOC107101186 LOC107101186 LOC107098778 LOC107098778 LOC107098202 LOC107098202 irx3 irx3 irx4 irx4 smad7 smad7 LOC107089713 LOC107089713 LOC107084085 LOC107084085 LOC107103470 LOC107103470 zcchc4 zcchc4 LOC107097790 LOC107097790 mapk1 mapk1 irx6 irx6 skil skil nog nog LOC107100409 LOC107100409 LOC107100843 LOC107100843 strap strap arhgef18 arhgef18 ENSCVAP00000018292 ENSCVAP00000018292 ccnt2 ccnt2 LOC107088450 LOC107088450 ACVR1B ACVR1B LOC107086786 LOC107086786 LOC107103972 LOC107103972 ENSCVAP00000018988 ENSCVAP00000018988 LOC107083120 LOC107083120 acvr2a acvr2a TGFBR2 TGFBR2 ENSCVAP00000019539 ENSCVAP00000019539 usp9x usp9x cdk19 cdk19 Cdk19 Cdk19 LOC107084983 LOC107084983 stub1 stub1 LOC107096250 LOC107096250 ENSCVAP00000021102 ENSCVAP00000021102 meis2 meis2 ENSCVAP00000021340 ENSCVAP00000021340 LOC107095691 LOC107095691 ENSCVAP00000021667 ENSCVAP00000021667 atp1b4 atp1b4 rnf111 rnf111 fstl3 fstl3 ccnc ccnc ENSCVAP00000023551 ENSCVAP00000023551 kxd1 kxd1 bmpr1b bmpr1b LOC107087652 LOC107087652 ski ski LOC107091036 LOC107091036 cbl cbl smad3 smad3 smad6 smad6 ENSCVAP00000024128 ENSCVAP00000024128 cdk8 cdk8 ldlrad4 ldlrad4 LOC107084421 LOC107084421 irx2 irx2 LOC107104447 LOC107104447 SMAD3 SMAD3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107104615SMAD specific E3 ubiquitin protein ligase 2. (372 aa)
LOC107101357Iroquois homeobox 4a. (473 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
FBN1Fibrillin 1. (2829 aa)
e2f4E2F transcription factor 4. (378 aa)
cgnCingulin a. (1198 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (400 aa)
LOC107088435Bone morphogenetic protein 10, like. (462 aa)
ENSCVAP00000031960CYCLIN domain-containing protein; Belongs to the cyclin family. (220 aa)
LOC107099242F11 receptor, tandem duplicate 1. (298 aa)
LOC107088457Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (538 aa)
LOC107090159Mothers against decapentaplegic homolog. (464 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (979 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (792 aa)
LOC107086814Mohawk homeobox b. (401 aa)
acvr2bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (573 aa)
fstFollistatin a. (347 aa)
LOC107093036Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (505 aa)
nedd4lNEDD4 like E3 ubiquitin protein ligase. (1268 aa)
LOC107083715Iroquois homeobox 7. (317 aa)
LOC107096611JunB proto-oncogene, AP-1 transcription factor subunit a. (328 aa)
LOC107080995Inhibin subunit beta Ab. (130 aa)
LOC107099535Uncharacterized protein. (1151 aa)
bambiBMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family. (254 aa)
ltbp2Uncharacterized protein. (2005 aa)
ncor2Nuclear receptor corepressor 2. (2268 aa)
ENSCVAP00000027729Multiple endocrine neoplasia I. (444 aa)
LOC107083535Cbl proto-oncogene C, E3 ubiquitin protein ligase. (566 aa)
irx5Iroquois homeobox 5a. (451 aa)
LOC107093694Iroquois homeobox 1b. (441 aa)
bmpr1aSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (522 aa)
ENSCVAP00000007375TGF_BETA_2 domain-containing protein. (287 aa)
ENSCVAP00000007060DUF3480 domain-containing protein. (296 aa)
sp1Sp1 transcription factor. (442 aa)
LOC107098322Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (510 aa)
ENSCVAP00000005986Noggin; Belongs to the noggin family. (224 aa)
foxh1Forkhead box H1. (485 aa)
prkczProtein kinase C, zeta. (513 aa)
LOC107089350V-ski avian sarcoma viral oncogene homolog b. (676 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
pard3Par-3 family cell polarity regulator alpha, b. (1287 aa)
LOC107087707NEDD8 ubiquitin like modifier. (90 aa)
LOC107084459Mothers against decapentaplegic homolog. (516 aa)
furinFurin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (841 aa)
ENSCVAP00000003761Integrin beta; Belongs to the integrin beta chain family. (276 aa)
LOC107102488Ubiquitin-like domain-containing protein. (83 aa)
LOC107103699Transforming growth factor beta; Belongs to the TGF-beta family. (349 aa)
smad9Mothers against decapentaplegic homolog. (467 aa)
SMURF2E3 ubiquitin-protein ligase. (776 aa)
ccnt1Cyclin T1; Belongs to the cyclin family. (668 aa)
LOC107100064Myeloid ecotropic viral integration site 3. (419 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1052 aa)
LOC107100676Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (505 aa)
ENSCVAP00000009719C2 domain-containing protein. (65 aa)
ENSCVAP00000009945Par-3 family cell polarity regulator beta a. (72 aa)
LOC107092654Uncharacterized protein. (741 aa)
LOC107084752Integrin beta; Belongs to the integrin beta chain family. (762 aa)
snw1SNW domain containing 1. (498 aa)
ccnkCyclin K; Belongs to the cyclin family. (543 aa)
LTBP3Latent transforming growth factor beta binding protein 3. (1243 aa)
fkbp1bPeptidylprolyl isomerase. (108 aa)
ccnqCyclin Q; Belongs to the cyclin family. (267 aa)
bmp2Bone morphogenetic protein 2b. (413 aa)
ENSCVAP00000011286Mohawk homeobox a. (351 aa)
LOC107102949Homeobox domain-containing protein. (530 aa)
INHBBInhibin subunit beta B. (389 aa)
zfyve9Zinc finger, FYVE domain containing 9a. (1183 aa)
itgb8Integrin beta; Belongs to the integrin beta chain family. (762 aa)
tfdp1Transcription factor. (410 aa)
LOC107093506Chordin-like 2. (465 aa)
trim33Tripartite motif containing 33. (1232 aa)
smad1Mothers against decapentaplegic homolog. (467 aa)
LOC107095805Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (810 aa)
bmp10Bone morphogenetic protein 10. (487 aa)
smad2Mothers against decapentaplegic homolog. (474 aa)
LOC107094587TGFB-induced factor homeobox 1. (299 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (233 aa)
LOC107095752Meis homeobox 1 b. (387 aa)
LOC107081990Si:dkey-235d18.5. (808 aa)
rbl1Retinoblastoma-like 1 (p107). (925 aa)
LOC107087195E3 ubiquitin-protein ligase. (729 aa)
ENSCVAP00000002779GPS2_interact domain-containing protein. (204 aa)
Ncor1Uncharacterized protein. (946 aa)
acvr1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (718 aa)
ACVR1CReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (493 aa)
LOC107089450Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (514 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (372 aa)
rps27aRibosomal protein S27a. (181 aa)
LOC107087093CBFD_NFYB_HMF domain-containing protein. (106 aa)
ENSCVAP00000012118E2F_TDP domain-containing protein. (76 aa)
LOC107099467Latent transforming growth factor beta binding protein 1. (1175 aa)
itgb6Integrin beta; Belongs to the integrin beta chain family. (781 aa)
LOC107093738Uncharacterized protein. (1257 aa)
LOC107094847Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (485 aa)
LOC107101186Mitogen-activated protein kinase. (379 aa)
LOC107098778Mothers against decapentaplegic homolog. (466 aa)
LOC107098202Uncharacterized protein. (860 aa)
irx3Iroquois homeobox 3a. (429 aa)
irx4Iroquois homeobox 4b. (338 aa)
smad7Mothers against decapentaplegic homolog. (366 aa)
LOC107089713Anti-Mullerian hormone. (513 aa)
LOC107084085Myosin_tail_1 domain-containing protein. (1190 aa)
LOC107103470Inhibin subunit beta B. (392 aa)
zcchc4Zinc finger, CCHC domain containing 4. (492 aa)
LOC107097790Mothers against decapentaplegic homolog. (500 aa)
mapk1Mitogen-activated protein kinase. (351 aa)
irx6Iroquois homeobox 6a. (488 aa)
skilSKI-like proto-oncogene a. (767 aa)
nogNoggin; Belongs to the noggin family. (210 aa)
LOC107100409Homeobox domain-containing protein. (388 aa)
LOC107100843Fibrillin 2b. (2746 aa)
strapSerine/threonine kinase receptor associated protein. (277 aa)
arhgef18Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1077 aa)
ENSCVAP00000018292Uncharacterized protein. (117 aa)
ccnt2Cyclin T2; Belongs to the cyclin family. (695 aa)
LOC107088450Mothers against decapentaplegic homolog. (503 aa)
ACVR1BReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (495 aa)
LOC107086786Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (504 aa)
LOC107103972Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (739 aa)
ENSCVAP00000018988Uncharacterized protein. (313 aa)
LOC107083120Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
acvr2aSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (528 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (542 aa)
ENSCVAP00000019539Uncharacterized protein. (291 aa)
usp9xUbiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2268 aa)
cdk19Cyclin-dependent kinase 19. (336 aa)
Cdk19Uncharacterized protein. (82 aa)
LOC107084983Noggin; Belongs to the noggin family. (211 aa)
stub1STIP1 homology and U-Box containing protein 1. (284 aa)
LOC107096250Growth differentiation factor 2. (421 aa)
ENSCVAP00000021102MH2 domain-containing protein. (204 aa)
meis2Meis homeobox 2a. (478 aa)
ENSCVAP00000021340Zinc finger, FYVE domain containing 9b. (347 aa)
LOC107095691DAN domain family, member 5. (261 aa)
ENSCVAP00000021667Ubiquitin-like domain-containing protein. (83 aa)
atp1b4Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (337 aa)
rnf111Ring finger protein 111. (1024 aa)
fstl3Follistatin-like 3 (secreted glycoprotein). (250 aa)
ccncCyclin C; Belongs to the cyclin family. (283 aa)
ENSCVAP00000023551Uncharacterized protein. (700 aa)
kxd1KxDL motif containing 1. (184 aa)
bmpr1bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
LOC107087652JunB proto-oncogene, AP-1 transcription factor subunit b. (329 aa)
skiV-ski avian sarcoma viral oncogene homolog a. (724 aa)
LOC107091036Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (516 aa)
cblCbl proto-oncogene, E3 ubiquitin protein ligase. (952 aa)
smad3Mothers against decapentaplegic homolog. (425 aa)
smad6Mothers against decapentaplegic homolog. (492 aa)
ENSCVAP00000024128Par3_HAL_N_term domain-containing protein. (94 aa)
cdk8Cyclin-dependent kinase 8; Belongs to the protein kinase superfamily. (464 aa)
ldlrad4Low density lipoprotein receptor class A domain containing 4b. (294 aa)
LOC107084421Iroquois homeobox 1a. (496 aa)
irx2Iroquois homeobox 2a. (501 aa)
LOC107104447Inhibin subunit beta Aa. (445 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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