STRINGSTRING
ytzG ytzG smc smc CCDG5_0996 CCDG5_0996 CCDG5_0997 CCDG5_0997 scpB scpB CCDG5_0999 CCDG5_0999 CCDG5_1000 CCDG5_1000 CCDG5_1001 CCDG5_1001 CCDG5_1002 CCDG5_1002 cmk cmk der der
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ytzGPutative RNA pseudouridine synthase YtzG; High confidence in function and specificity; Belongs to the pseudouridine synthase RsuA family. (242 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1190 aa)
CCDG5_0996Peptidase M50; High confidence in function and specificity. (224 aa)
CCDG5_0997Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (236 aa)
scpBHypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (181 aa)
CCDG5_0999Hypothetical protein; Family membership. (204 aa)
CCDG5_1000Hypothetical protein. (141 aa)
CCDG5_1001Pseudouridine synthase; High confidence in function and specificity; Belongs to the pseudouridine synthase RsuA family. (246 aa)
CCDG5_1002Hypothetical protein. (127 aa)
cmkCytidylate kinase; High confidence in function and specificity. (227 aa)
derGTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (442 aa)
Your Current Organism:
Clostridium cellulosi
NCBI taxonomy Id: 29343
Other names: [. cellulosi, [Clostridium] cellulosi
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