STRINGSTRING
recR recR A1C_03120 A1C_03120 nuoD nuoD rpsD-2 rpsD-2 A1C_02535 A1C_02535 A1C_02530 A1C_02530 A1C_02470 A1C_02470 A1C_02320 A1C_02320 ctaG ctaG A1C_01965 A1C_01965 pdhA pdhA A1C_01870 A1C_01870 rpmI-2 rpmI-2 A1C_01790 A1C_01790 rpsI rpsI rplM rplM A1C_01680 A1C_01680 A1C_01580 A1C_01580 A1C_01470 A1C_01470 A1C_01310 A1C_01310 A1C_01290 A1C_01290 A1C_01265 A1C_01265 A1C_01220 A1C_01220 A1C_01145 A1C_01145 rplL rplL rplJ rplJ nusG nusG rpsG rpsG rpsL rpsL sdhA sdhA A1C_00895 A1C_00895 rplS rplS ackA ackA A1C_00755 A1C_00755 rpmB rpmB A1C_00710 A1C_00710 A1C_00695 A1C_00695 A1C_00690 A1C_00690 A1C_00655 A1C_00655 rpsB rpsB A1C_00575 A1C_00575 A1C_00470 A1C_00470 A1C_00410 A1C_00410 A1C_00390 A1C_00390 rplI rplI rpsR rpsR rpsF-2 rpsF-2 A1C_00295 A1C_00295 A1C_00275 A1C_00275 recF recF A1C_00095 A1C_00095 A1C_00055 A1C_00055 hemH hemH A1C_06835 A1C_06835 rpmG rpmG rpsP rpsP A1C_06725 A1C_06725 A1C_06705 A1C_06705 A1C_06675 A1C_06675 dnaG dnaG truA-2 truA-2 A1C_06445 A1C_06445 tadA tadA A1C_06285 A1C_06285 rpmF rpmF fabG fabG A1C_05885 A1C_05885 rnhA rnhA dnaQ dnaQ A1C_05855 A1C_05855 tlyC tlyC ybeY ybeY A1C_05760 A1C_05760 A1C_05755 A1C_05755 A1C_05750 A1C_05750 nth nth rplU rplU rpmA rpmA A1C_05675 A1C_05675 A1C_05670 A1C_05670 A1C_05555 A1C_05555 ubiA ubiA A1C_05185 A1C_05185 A1C_05170 A1C_05170 rpsJ rpsJ rplC rplC rplD rplD rplW rplW rplB rplB rpsS rpsS rplV rplV rpsC rpsC rplP rplP rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsN rpsN rpsH rpsH rplF rplF rplR rplR rpsE rpsE rpmD rpmD rplO rplO adk adk rpsM rpsM rpsK rpsK rplQ rplQ rpsT rpsT A1C_04965 A1C_04965 A1C_04880 A1C_04880 A1C_04855 A1C_04855 rpsU rpsU A1C_04815 A1C_04815 rnpA rnpA rplT rplT ctaA ctaA rplY rplY A1C_04740 A1C_04740 ychF ychF dnaA dnaA A1C_04680 A1C_04680 A1C_04520 A1C_04520 rpsA rpsA fni fni rpmJ rpmJ A1C_04140 A1C_04140 A1C_04120 A1C_04120 A1C_04080 A1C_04080 nusA nusA infB infB A1C_04060 A1C_04060 recO recO A1C_04010 A1C_04010 ubiX ubiX priA priA A1C_03965 A1C_03965 iscS iscS A1C_03900 A1C_03900 A1C_03790 A1C_03790 A1C_03690 A1C_03690 A1C_03640 A1C_03640 A1C_03625 A1C_03625 rpsO rpsO A1C_03445 A1C_03445 A1C_03410 A1C_03410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (207 aa)
A1C_03120COG0438 Glycosyltransferase. (340 aa)
nuoDNADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (394 aa)
rpsD-230S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (205 aa)
A1C_02535COG0438 Glycosyltransferase. (390 aa)
A1C_02530Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (253 aa)
A1C_02470Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (154 aa)
A1C_02320Periplasmic protein TonB. (326 aa)
ctaGCytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (181 aa)
A1C_01965Heat shock protein; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family. (163 aa)
pdhAPyruvate dehydrogenase e1 component, alpha subunit precursor; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (326 aa)
A1C_01870Ribosomal large subunit pseudouridine synthase C; COG0564 Pseudouridylate synthases, 23S RNA-specific; Belongs to the pseudouridine synthase RluA family. (303 aa)
rpmI-2COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (68 aa)
A1C_01790Hypothetical protein; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. (80 aa)
rpsICOG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (161 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (155 aa)
A1C_01680COG0666 FOG: Ankyrin repeat. (604 aa)
A1C_01580Putative ATPase n2B; COG1485 Predicted ATPase. (350 aa)
A1C_01470COG0633 Ferredoxin. (112 aa)
A1C_01310DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (546 aa)
A1C_01290Hypothetical protein; COG0720 6-pyruvoyl-tetrahydropterin synthase. (147 aa)
A1C_01265Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (393 aa)
A1C_01220DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (110 aa)
A1C_01145Hypothetical protein. (360 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (169 aa)
nusGTranscription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (192 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (160 aa)
rpsL30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. (129 aa)
sdhACOG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (596 aa)
A1C_00895Hypothetical protein; COG3660 Predicted nucleoside-diphosphate-sugar epimerase. (393 aa)
rplS50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (138 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (385 aa)
A1C_00755COG0254 Ribosomal protein L31. (78 aa)
rpmBCOG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (97 aa)
A1C_00710COG1398 Fatty-acid desaturase. (397 aa)
A1C_00695Predicted esterase of the alpha-beta hydrolase superfamily protein. (56 aa)
A1C_00690Predicted esterase of the alpha-beta hydrolase superfamily protein. (83 aa)
A1C_00655Hypothetical protein; COG0457 FOG: TPR repeat. (334 aa)
rpsBCOG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (295 aa)
A1C_00575COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (294 aa)
A1C_00470Stage 0 sporulation protein J; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (286 aa)
A1C_00410CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (181 aa)
A1C_00390Hypothetical protein. (374 aa)
rplI50S ribosomal protein L9; Binds to the 23S rRNA. (171 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (95 aa)
rpsF-230S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (142 aa)
A1C_00295Poly(A) polymerase; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (385 aa)
A1C_00275Tetratricopeptide repeat-containing protein; COG0459 Chaperonin GroEL (HSP60 family). (169 aa)
recFRecombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. (360 aa)
A1C_00095acetoacetyl-CoA reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (241 aa)
A1C_00055Predicted esterase of the alpha-beta hydrolase superfamily protein. (151 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (344 aa)
A1C_06835Oxidoreductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (88 aa)
rpmGCOG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (56 aa)
rpsPCOG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (111 aa)
A1C_06725COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I. (254 aa)
A1C_06705Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa)
A1C_06675COG0170 Dolichol kinase. (204 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (595 aa)
truA-2tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (245 aa)
A1C_06445Cation diffusion facilitator family transporter; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (301 aa)
tadACytosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (159 aa)
A1C_06285Hypothetical protein; COG0271 Stress-induced morphogen (activity unknown); Belongs to the BolA/IbaG family. (79 aa)
rpmFCOG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (66 aa)
fabG3-ketoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (241 aa)
A1C_05885Hypothetical protein; COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit. (99 aa)
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (152 aa)
dnaQDNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (229 aa)
A1C_05855Surfeit locus protein 1. (206 aa)
tlyCCOG1253 Hemolysins and related proteins containing CBS domains. (301 aa)
ybeYHypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (167 aa)
A1C_05760COG0863 DNA modification methylase. (44 aa)
A1C_05755DNA modification methylase. (41 aa)
A1C_05750Hypothetical protein. (64 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (228 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (105 aa)
rpmACOG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (86 aa)
A1C_05675Hypothetical protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold. (111 aa)
A1C_05670Hypothetical protein; COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold. (84 aa)
A1C_05555Integration host factor alpha-subunit; COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family. (96 aa)
ubiAPrenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (280 aa)
A1C_05185COG0513 Superfamily II DNA and RNA helicases. (410 aa)
A1C_05170COG0694 Thioredoxin-like proteins and domains. (190 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (105 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (215 aa)
rplD50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (207 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplV50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (119 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (217 aa)
rplP50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa)
rpmCCOG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (71 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (77 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rplX50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (109 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rplF50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (118 aa)
rpsE30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (176 aa)
rpmDCOG1841 Ribosomal protein L30/L7E. (63 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (153 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (212 aa)
rpsM30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (125 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (127 aa)
rplQCOG0203 Ribosomal protein L17. (138 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (90 aa)
A1C_04965Hypothetical protein; COG0593 ATPase involved in DNA replication initiation; Belongs to the DnaA family. (222 aa)
A1C_04880Hypothetical protein; COG3070 Regulator of competence-specific genes. (89 aa)
A1C_04855COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit. (665 aa)
rpsUCOG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (66 aa)
A1C_04815Acetyltransferase; COG3173 Predicted aminoglycoside phosphotransferase. (173 aa)
rnpACOG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
ctaACytochrome c oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (318 aa)
rplY50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (199 aa)
A1C_04740Acetyltransferase. (58 aa)
ychFTranslation-associated GTPase; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa)
dnaAChromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (463 aa)
A1C_04680Hypothetical protein. (87 aa)
A1C_04520Magnesium transporter; Acts as a magnesium transporter. (456 aa)
rpsA30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (568 aa)
fniIsopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (342 aa)
rpmJHypothetical protein; Belongs to the bacterial ribosomal protein bL36 family. (41 aa)
A1C_04140Biotin synthesis protein BioC; COG0500 SAM-dependent methyltransferases. (226 aa)
A1C_04120Hypothetical protein. (263 aa)
A1C_04080Fic. (129 aa)
nusATranscription elongation factor NusA; Participates in both transcription termination and antitermination. (503 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (829 aa)
A1C_04060Hypothetical protein; COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain). (342 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (237 aa)
A1C_04010Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (494 aa)
ubiXAromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (188 aa)
priAPrimosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (648 aa)
A1C_03965Hypothetical protein; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes. (371 aa)
iscSCysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. (410 aa)
A1C_03900COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase. (191 aa)
A1C_03790Integration host factor beta-subunit; COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family. (82 aa)
A1C_03690Hypothetical protein. (36 aa)
A1C_03640Pyruvate phosphate dikinase; COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (878 aa)
A1C_03625Hypothetical protein. (61 aa)
rpsO30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (91 aa)
A1C_03445Probable sigma(54) modulation protein; COG1544 Ribosome-associated protein Y (PSrp-1). (192 aa)
A1C_03410COG1171 Threonine dehydratase. (333 aa)
Your Current Organism:
Rickettsia akari
NCBI taxonomy Id: 293614
Other names: R. akari str. Hartford, Rickettsia akari str. Hartford, Rickettsia akari strain Hartford
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