(16 nodes) ATP-binding cassette (ABC) transporter complex network (Moraxella ovis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hisQ	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
	yecS	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	dppA	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
	oppA_1	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
	lptF	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
	drrA	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
	yadH	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
	oppA_3	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
	lptB	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	pstS	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (384 aa)
	oppA_2	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
	znuB	DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	mntB_2	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
	mntB_1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
	lptG	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
	fbpC	Iron ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (338 aa)

Your Current Organism:

Moraxella ovis

NCBI taxonomy Id: 29433
Other names: ATCC 33078, CCUG 354, DSM 18075, LMG 8381, LMG:8381, M. ovis, NCTC 11227, Neisseria ovis, strain 199/55

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dppA	oppA_1	MOVS_07615	MOVS_00190	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
dppA	oppA_2	MOVS_07615	MOVS_03270	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.552
dppA	oppA_3	MOVS_07615	MOVS_06275	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
dppA	pstS	MOVS_07615	MOVS_03465	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.442
drrA	yadH	MOVS_07220	MOVS_07215	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
hisQ	yecS	MOVS_09890	MOVS_09895	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
lptB	lptF	MOVS_05900	MOVS_00255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
lptB	lptG	MOVS_05900	MOVS_00260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
lptB	yecS	MOVS_05900	MOVS_09895	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
lptF	lptB	MOVS_00255	MOVS_05900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
lptF	lptG	MOVS_00255	MOVS_00260	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
lptG	lptB	MOVS_00260	MOVS_05900	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
lptG	lptF	MOVS_00260	MOVS_00255	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
mntB_1	mntB_2	MOVS_02245	MOVS_02250	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
mntB_1	znuB	MOVS_02245	MOVS_01880	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.515
mntB_2	mntB_1	MOVS_02250	MOVS_02245	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
mntB_2	znuB	MOVS_02250	MOVS_01880	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
oppA_1	dppA	MOVS_00190	MOVS_07615	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
oppA_1	oppA_2	MOVS_00190	MOVS_03270	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
oppA_1	oppA_3	MOVS_00190	MOVS_06275	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903