STRINGSTRING
Bpro_0087 Bpro_0087 Bpro_0088 Bpro_0088 Bpro_0089 Bpro_0089 Bpro_0090 Bpro_0090 Bpro_0092 Bpro_0092 Bpro_0093 Bpro_0093 Bpro_0094 Bpro_0094 Bpro_0095 Bpro_0095
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Bpro_0087Conserved hypothetical protein. (276 aa)
Bpro_0088TRAP dicarboxylate transporter, DctP subunit. (331 aa)
Bpro_0089Tripartite ATP-independent periplasmic transporter, DctQ component. (188 aa)
Bpro_0090TRAP dicarboxylate transporter- DctM subunit. (446 aa)
Bpro_0092Short-chain dehydrogenase/reductase SDR. (253 aa)
Bpro_0093Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family. (413 aa)
Bpro_0094Type III effector Hrp-dependent outers domain protein. (457 aa)
Bpro_0095Transcriptional regulator, GntR family. (237 aa)
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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