56 items (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D2M312	NAC domain-containing protein. (294 aa)
	A0A0D2MRH6	UBIQUITIN_CONJUGAT_2 domain-containing protein. (134 aa)
	A0A0D2N6L3	NAC domain-containing protein. (450 aa)
	A0A0D2N7E0	Uncharacterized protein. (983 aa)
	A0A0D2NIE8	Small ubiquitin-related modifier. (117 aa)
	A0A0D2NJ28	SP-RING-type domain-containing protein. (256 aa)
	A0A0D2P0C7	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (163 aa)
	A0A0D2P312	Uncharacterized protein. (287 aa)
	A0A0D2P7H0	Small ubiquitin-related modifier. (102 aa)
	A0A0D2P996	Rad60-SLD domain-containing protein. (113 aa)
	A0A0D2PGQ7	NAC domain-containing protein. (481 aa)
	A0A0D2PL93	NAC domain-containing protein. (444 aa)
	A0A0D2PRV0	NAC domain-containing protein. (501 aa)
	A0A0D2PZE2	Uncharacterized protein. (284 aa)
	A0A0D2Q0D1	NAC domain-containing protein. (279 aa)
	A0A0D2Q6N5	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (304 aa)
	A0A0D2Q8U4	Uncharacterized protein. (234 aa)
	A0A0D2QEB8	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (143 aa)
	A0A0D2QIB0	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (626 aa)
	A0A0D2QMY2	Small ubiquitin-related modifier. (96 aa)
	A0A0D2QPM3	NAC domain-containing protein. (635 aa)
	A0A0D2QTR5	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (96 aa)
	A0A0D2QTX6	Small ubiquitin-related modifier. (102 aa)
	A0A0D2QUM6	NAC domain-containing protein. (402 aa)
	A0A0D2QWF5	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
	A0A0D2QY73	Small ubiquitin-related modifier. (98 aa)
	A0A0D2R273	NAC domain-containing protein. (268 aa)
	A0A0D2R3M4	NAC domain-containing protein. (483 aa)
	A0A0D2R7L5	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (88 aa)
	A0A0D2REJ9	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (230 aa)
	A0A0D2RFY7	RING-type domain-containing protein. (486 aa)
	A0A0D2RML1	NAC domain-containing protein. (859 aa)
	A0A0D2RV31	Uncharacterized protein. (234 aa)
	A0A0D2S130	NAC domain-containing protein. (371 aa)
	A0A0D2S5W2	Uncharacterized protein. (230 aa)
	A0A0D2S9D6	NAC domain-containing protein. (319 aa)
	A0A0D2SJY3	NAC domain-containing protein. (254 aa)
	A0A0D2T4W1	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (856 aa)
	A0A0D2TA84	SMC_N domain-containing protein. (1058 aa)
	A0A0D2TBM6	Ubiquitin-like domain-containing protein. (160 aa)
	A0A0D2TDC9	NAC domain-containing protein. (452 aa)
	A0A0D2TL06	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (391 aa)
	A0A0D2TLL5	Uncharacterized protein. (164 aa)
	A0A0D2TZ80	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (102 aa)
	A0A0D2TZV0	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (201 aa)
	A0A0D2U053	Ubiquitin-like domain-containing protein. (115 aa)
	A0A0D2UD34	RING-type domain-containing protein. (487 aa)
	A0A0D2UD93	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (160 aa)
	A0A0D2UIG0	NAC domain-containing protein. (410 aa)
	A0A0D2UP44	Uncharacterized protein. (239 aa)
	A0A0D2UPI2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (135 aa)
	A0A0D2UW98	Rad60-SLD domain-containing protein. (103 aa)
	A0A0D2VEC9	Small ubiquitin-related modifier. (98 aa)
	A0A0D2VHE0	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (629 aa)
	A0A0D2VNB2	Uncharacterized protein. (261 aa)
	A0A0D2W7A6	SMC_N domain-containing protein. (1051 aa)

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2M312	A0A0D2N7E0	NAC domain-containing protein.	Uncharacterized protein.	0.502
A0A0D2MRH6	A0A0D2N7E0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.633
A0A0D2MRH6	A0A0D2NIE8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Small ubiquitin-related modifier.	0.757
A0A0D2MRH6	A0A0D2NJ28	UBIQUITIN_CONJUGAT_2 domain-containing protein.	SP-RING-type domain-containing protein.	0.922
A0A0D2MRH6	A0A0D2P7H0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Small ubiquitin-related modifier.	0.757
A0A0D2MRH6	A0A0D2P996	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Rad60-SLD domain-containing protein.	0.757
A0A0D2MRH6	A0A0D2PZE2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.757
A0A0D2MRH6	A0A0D2Q6N5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.464
A0A0D2MRH6	A0A0D2QEB8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.464
A0A0D2MRH6	A0A0D2QMY2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Small ubiquitin-related modifier.	0.757
A0A0D2MRH6	A0A0D2QTR5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.464
A0A0D2MRH6	A0A0D2QTX6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Small ubiquitin-related modifier.	0.757
A0A0D2MRH6	A0A0D2QY73	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Small ubiquitin-related modifier.	0.757
A0A0D2MRH6	A0A0D2R7L5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.464
A0A0D2MRH6	A0A0D2REJ9	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.464
A0A0D2MRH6	A0A0D2RFY7	UBIQUITIN_CONJUGAT_2 domain-containing protein.	RING-type domain-containing protein.	0.462
A0A0D2MRH6	A0A0D2S5W2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.462
A0A0D2MRH6	A0A0D2TA84	UBIQUITIN_CONJUGAT_2 domain-containing protein.	SMC_N domain-containing protein.	0.762
A0A0D2MRH6	A0A0D2TBM6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.757
A0A0D2MRH6	A0A0D2TL06	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.464