(45 nodes) Heterochromatin assembly network (Vitis vinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D7THL8_VITVI	Uncharacterized protein. (255 aa)
	D7TF31_VITVI	Hat1_N domain-containing protein. (52 aa)
	D7TCU3_VITVI	CBFD_NFYB_HMF domain-containing protein. (193 aa)
	D7SPF5_VITVI	Uncharacterized protein. (481 aa)
	VITISV_017085	Matrin-type domain-containing protein. (257 aa)
	F6HMM2_VITVI	PMC2NT domain-containing protein. (233 aa)
	F6HMM1_VITVI	HRDC domain-containing protein. (698 aa)
	F6HI92_VITVI	Uncharacterized protein. (1023 aa)
	F6HGS1_VITVI	Uncharacterized protein. (462 aa)
	F6HCA3_VITVI	Uncharacterized protein. (1269 aa)
	F6HB58_VITVI	Spt5-NGN domain-containing protein. (158 aa)
	F6H8U6_VITVI	Uncharacterized protein. (672 aa)
	F6H8T3_VITVI	CXC domain-containing protein. (90 aa)
	F6H782_VITVI	Uncharacterized protein. (431 aa)
	F6H4J2_VITVI	Uncharacterized protein. (873 aa)
	F6GWX2_VITVI	Uncharacterized protein. (759 aa)
	F6GV06_VITVI	XH domain-containing protein. (302 aa)
	F6GUQ4_VITVI	Uncharacterized protein. (707 aa)
	F6GUQ3_VITVI	Uncharacterized protein. (1190 aa)
	F6GU59_VITVI	Uncharacterized protein. (681 aa)
	F6GU58_VITVI	Uncharacterized protein. (333 aa)
	F6I5P6_VITVI	Uncharacterized protein. (633 aa)
	F6I5P4_VITVI	Uncharacterized protein. (626 aa)
	F6I4U3_VITVI	Uncharacterized protein. (296 aa)
	F6I1B1_VITVI	Uncharacterized protein. (951 aa)
	F6I0N2_VITVI	SNF2_N domain-containing protein. (221 aa)
	F6GU20_VITVI	Uncharacterized protein. (1120 aa)
	D7UB91_VITVI	Chromo domain-containing protein. (424 aa)
	D7U679_VITVI	Uncharacterized protein. (146 aa)
	D7U4G0_VITVI	WD_REPEATS_REGION domain-containing protein. (456 aa)
	D7U0C6_VITVI	SAWADEE domain-containing protein. (247 aa)
	D7TSW6_VITVI	Spt5-NGN domain-containing protein. (124 aa)
	D7TQX5_VITVI	Uncharacterized protein. (251 aa)
	D7TLS7_VITVI	Uncharacterized protein. (641 aa)
	F6HZB9_VITVI	Uncharacterized protein. (185 aa)
	D7SHP0_VITVI	Morc6_S5 domain-containing protein. (709 aa)
	F6HZA1_VITVI	Uncharacterized protein. (865 aa)
	D7SL09_VITVI	Uncharacterized protein. (805 aa)
	F6HYX1_VITVI	Uncharacterized protein. (919 aa)
	F6HVZ2_VITVI	Uncharacterized protein. (993 aa)
	F6HUX5_VITVI	Morc6_S5 domain-containing protein. (630 aa)
	F6HUU1_VITVI	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (263 aa)
	F6HTE8_VITVI	Uncharacterized protein. (645 aa)
	F6HNX0_VITVI	XH domain-containing protein. (245 aa)
	F6HNC9_VITVI	Uncharacterized protein. (621 aa)

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SHP0_VITVI	F6H782_VITVI	D7SHP0	F6H782	Morc6_S5 domain-containing protein.	Uncharacterized protein.	0.503
D7SHP0_VITVI	F6H8U6_VITVI	D7SHP0	F6H8U6	Morc6_S5 domain-containing protein.	Uncharacterized protein.	0.454
D7SL09_VITVI	D7TCU3_VITVI	D7SL09	D7TCU3	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.425
D7SPF5_VITVI	D7TCU3_VITVI	D7SPF5	D7TCU3	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.748
D7SPF5_VITVI	F6H4J2_VITVI	D7SPF5	F6H4J2	Uncharacterized protein.	Uncharacterized protein.	0.410
D7SPF5_VITVI	F6H8T3_VITVI	D7SPF5	F6H8T3	Uncharacterized protein.	CXC domain-containing protein.	0.410
D7SPF5_VITVI	F6H8U6_VITVI	D7SPF5	F6H8U6	Uncharacterized protein.	Uncharacterized protein.	0.405
D7SPF5_VITVI	F6HZA1_VITVI	D7SPF5	F6HZA1	Uncharacterized protein.	Uncharacterized protein.	0.410
D7TCU3_VITVI	D7SL09_VITVI	D7TCU3	D7SL09	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.425
D7TCU3_VITVI	D7SPF5_VITVI	D7TCU3	D7SPF5	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.748
D7TCU3_VITVI	F6GU20_VITVI	D7TCU3	F6GU20	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.425
D7TCU3_VITVI	F6GU58_VITVI	D7TCU3	F6GU58	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.465
D7TCU3_VITVI	F6GU59_VITVI	D7TCU3	F6GU59	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.465
D7TCU3_VITVI	F6GWX2_VITVI	D7TCU3	F6GWX2	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.748
D7TCU3_VITVI	F6HCA3_VITVI	D7TCU3	F6HCA3	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.465
D7TCU3_VITVI	F6HTE8_VITVI	D7TCU3	F6HTE8	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.465
D7TCU3_VITVI	F6HVZ2_VITVI	D7TCU3	F6HVZ2	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.425
D7TCU3_VITVI	F6I0N2_VITVI	D7TCU3	F6I0N2	CBFD_NFYB_HMF domain-containing protein.	SNF2_N domain-containing protein.	0.465
D7TCU3_VITVI	F6I1B1_VITVI	D7TCU3	F6I1B1	CBFD_NFYB_HMF domain-containing protein.	Uncharacterized protein.	0.465
D7TQX5_VITVI	D7TSW6_VITVI	D7TQX5	D7TSW6	Uncharacterized protein.	Spt5-NGN domain-containing protein.	0.552