STRINGSTRING
VPS72 VPS72 PARP3 PARP3 A0A4W2BNU5 A0A4W2BNU5 OGG1 OGG1 ZNF365 ZNF365 TERF2IP TERF2IP SPIRE1 SPIRE1 INO80E INO80E UBR5 UBR5 HMGA2 HMGA2 FOXM1 FOXM1 MMS19 MMS19 UBE2V2 UBE2V2 KMT5C KMT5C BRCA1 BRCA1 PRKCG PRKCG TRIP12 TRIP12 FAM168A FAM168A EP400 EP400 PML PML MAD2L2 MAD2L2 EYA1 EYA1 CGAS CGAS FBH1 FBH1 PPP4R3B PPP4R3B RAD51AP1 RAD51AP1 CEBPG CEBPG HDAC10 HDAC10 A0A4W2DZY8 A0A4W2DZY8 TP53BP1 TP53BP1 ACTB ACTB MORF4L1 MORF4L1 HSF1 HSF1 SMCHD1 SMCHD1 RUVBL1 RUVBL1 A0A4W2DUQ2 A0A4W2DUQ2 FMN2 FMN2 KDM1A KDM1A SIRT1 SIRT1 CHEK1 CHEK1 SETD2 SETD2 ACTR8 ACTR8 ZCWPW1 ZCWPW1 RBBP8 RBBP8 WAS WAS A0A4W2DN34 A0A4W2DN34 SIRT6 SIRT6 USP1 USP1 TWIST1 TWIST1 DMAP1 DMAP1 CYREN CYREN A0A4W2D9V3 A0A4W2D9V3 MAGEF1 MAGEF1 PCNA PCNA PIAS4 PIAS4 ACTL6A ACTL6A RNF168 RNF168 SLF1 SLF1 NSD2 NSD2 PARG PARG ERCC6 ERCC6 SHLD2 SHLD2 RAD51 RAD51 PARP1 PARP1 A0A4W2CX26 A0A4W2CX26 A0A4W2CWA2 A0A4W2CWA2 INO80 INO80 A0A4W2CV54 A0A4W2CV54 A0A4W2CT96 A0A4W2CT96 A0A4W2CSP1 A0A4W2CSP1 MRGBP MRGBP ING3 ING3 CUL4A CUL4A EYA2 EYA2 EPC1 EPC1 A0A4W2CLZ1 A0A4W2CLZ1 INO80D INO80D A0A4W2CJK2 A0A4W2CJK2 AXIN2 AXIN2 SPIDR SPIDR RNF169 RNF169 RPS3 RPS3 KAT7 KAT7 A0A4W2CG09 A0A4W2CG09 XRCC1 XRCC1 PRKDC PRKDC TEX15 TEX15 A0A4W2CDR2 A0A4W2CDR2 A0A4W2CCW8 A0A4W2CCW8 A0A4W2CBX4 A0A4W2CBX4 EGFR EGFR WRAP53 WRAP53 RUVBL2 RUVBL2 DHX9 DHX9 YEATS4 YEATS4 OTUB1 OTUB1 OOEP OOEP CCDC197 CCDC197 RAD52 RAD52 RECQL5 RECQL5 YY1 YY1 MFSD11 MFSD11 SLF2 SLF2 A0A4W2BZY5 A0A4W2BZY5 A0A4W2BZA0 A0A4W2BZA0 KMT5B KMT5B PPP4C PPP4C WRNIP1 WRNIP1 KLHL15 KLHL15 DEK DEK FUS FUS KAT5 KAT5 TFPT TFPT TIGAR TIGAR PARPBP PARPBP RMI2 RMI2 ERCC8 ERCC8 FGF10 FGF10 RNF8 RNF8 HELB HELB AUNIP AUNIP UCHL5 UCHL5 BABAM2 BABAM2 TRIM28 TRIM28 BCL7C BCL7C ARID2 ARID2 WDR48 WDR48 POT1 POT1 MCRS1 MCRS1 OTUB2 OTUB2 RTEL1 RTEL1 CDK9 CDK9 TIMELESS TIMELESS NPAS2 NPAS2 SPIRE2 SPIRE2 TMEM161A TMEM161A MBTD1 MBTD1 NUDT16L1 NUDT16L1 EYA3 EYA3 NFRKB NFRKB CCDC117 CCDC117 EPC2 EPC2 UBQLN4 UBQLN4 A0A4W2EZ53 A0A4W2EZ53 RIF1 RIF1 A0A4W2EYF1 A0A4W2EYF1 BABAM1 BABAM1 BRD8 BRD8 POGZ POGZ PPP4R2 PPP4R2 FIGNL1 FIGNL1 ABRAXAS1 ABRAXAS1 HELQ HELQ UIMC1 UIMC1 A0A4W2ERQ5 A0A4W2ERQ5 HDGFL2 HDGFL2 DTX3L DTX3L POLQ POLQ A0A4W2EMP6 A0A4W2EMP6 EYA4 EYA4 PNKP PNKP BCL7A BCL7A SIRT7 SIRT7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VPS72Vacuolar protein sorting 72 homolog. (364 aa)
PARP3Poly [ADP-ribose] polymerase. (515 aa)
A0A4W2BNU5Reverse transcriptase domain-containing protein. (1128 aa)
OGG18-oxoguanine DNA glycosylase. (345 aa)
ZNF365Zinc finger protein 365. (405 aa)
TERF2IPTERF2 interacting protein. (399 aa)
SPIRE1Spire type actin nucleation factor 1. (781 aa)
INO80EINO80 complex subunit E. (244 aa)
UBR5Ubiquitin protein ligase E3 component n-recognin 5. (2798 aa)
HMGA2Uncharacterized protein. (109 aa)
FOXM1Fork-head domain-containing protein. (760 aa)
MMS19MMS19 homolog, cytosolic iron-sulfur assembly component. (1030 aa)
UBE2V2Ubiquitin conjugating enzyme E2 V2. (212 aa)
KMT5CLysine methyltransferase 5C. (438 aa)
BRCA1BRCA1 DNA repair associated. (1941 aa)
PRKCGProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (771 aa)
TRIP12Thyroid hormone receptor interactor 12. (2040 aa)
FAM168AFamily with sequence similarity 168 member A. (244 aa)
EP400E1A binding protein p400. (3096 aa)
PMLPromyelocytic leukemia. (871 aa)
MAD2L2Mitotic arrest deficient 2 like 2. (211 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (700 aa)
CGASCyclic GMP-AMP synthase. (513 aa)
FBH1F-box DNA helicase 1. (1045 aa)
PPP4R3BProtein phosphatase 4 regulatory subunit 3B. (820 aa)
RAD51AP1RAD51 associated protein 1. (366 aa)
CEBPGCCAAT enhancer binding protein gamma. (149 aa)
HDAC10Histone deacetylase 10. (671 aa)
A0A4W2DZY8MOEP19 domain-containing protein. (598 aa)
TP53BP1Tumor protein p53 binding protein 1. (1966 aa)
ACTBActin beta. (375 aa)
MORF4L1Mortality factor 4 like 1. (362 aa)
HSF1Heat shock transcription factor 1. (553 aa)
SMCHD1Structural maintenance of chromosomes flexible hinge domain containing 1. (1997 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
A0A4W2DUQ2FH2 domain-containing protein. (248 aa)
FMN2Formin 2. (1611 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (877 aa)
SIRT1Sirtuin 1. (734 aa)
CHEK1Checkpoint kinase 1. (677 aa)
SETD2SET domain containing 2, histone lysine methyltransferase. (2563 aa)
ACTR8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (832 aa)
ZCWPW1Zinc finger CW-type and PWWP domain containing 1. (644 aa)
RBBP8RB binding protein 8, endonuclease. (859 aa)
WASWASP actin nucleation promoting factor. (559 aa)
A0A4W2DN34KH type-2 domain-containing protein. (85 aa)
SIRT6Sirtuin 6. (391 aa)
USP1Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (783 aa)
TWIST1Twist family bHLH transcription factor 1. (201 aa)
DMAP1DNA methyltransferase 1 associated protein 1. (513 aa)
CYRENCell cycle regulator of NHEJ. (152 aa)
A0A4W2D9V3Reverse transcriptase domain-containing protein. (738 aa)
MAGEF1MAGE family member F1. (307 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (326 aa)
PIAS4Protein inhibitor of activated STAT 4. (573 aa)
ACTL6AActin like 6A; Belongs to the actin family. (429 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (573 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1175 aa)
NSD2Nuclear receptor binding SET domain protein 2. (1365 aa)
PARGPoly(ADP-ribose) glycohydrolase. (946 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1544 aa)
SHLD2Shieldin complex subunit 2. (962 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
PARP1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1016 aa)
A0A4W2CX26Uncharacterized protein. (284 aa)
A0A4W2CWA2Uncharacterized protein. (226 aa)
INO80INO80 complex ATPase subunit. (1584 aa)
A0A4W2CV54Reverse transcriptase domain-containing protein. (798 aa)
A0A4W2CT96Reverse transcriptase domain-containing protein. (1169 aa)
A0A4W2CSP1Uncharacterized protein. (319 aa)
MRGBPMRG domain binding protein. (204 aa)
ING3Inhibitor of growth protein. (418 aa)
CUL4ACullin 4A; Belongs to the cullin family. (731 aa)
EYA2Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (552 aa)
EPC1Enhancer of polycomb homolog. (842 aa)
A0A4W2CLZ1Reverse transcriptase domain-containing protein. (704 aa)
INO80DINO80 complex subunit D. (1026 aa)
A0A4W2CJK2Uncharacterized protein. (291 aa)
AXIN2Axin 2. (836 aa)
SPIDRScaffold protein involved in DNA repair. (831 aa)
RNF169Ring finger protein 169. (708 aa)
RPS3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (281 aa)
KAT7Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (611 aa)
A0A4W2CG09MAGE domain-containing protein. (153 aa)
XRCC1X-ray repair cross complementing 1. (692 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4122 aa)
TEX15Testis expressed 15, meiosis and synapsis associated. (2864 aa)
A0A4W2CDR2Reverse transcriptase domain-containing protein. (738 aa)
A0A4W2CCW8Reverse transcriptase domain-containing protein. (1148 aa)
A0A4W2CBX4Uncharacterized protein. (152 aa)
EGFRReceptor protein-tyrosine kinase. (1209 aa)
WRAP53WD repeat containing antisense to TP53. (540 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
DHX9DExH-box helicase 9. (1287 aa)
YEATS4YEATS domain containing 4. (227 aa)
OTUB1Ubiquitin thioesterase. (291 aa)
OOEPOocyte expressed protein. (140 aa)
CCDC197Coiled-coil domain containing 197. (290 aa)
RAD52RAD52 homolog, DNA repair protein. (416 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (987 aa)
YY1YY1 transcription factor. (415 aa)
MFSD11Major facilitator superfamily domain containing 11. (449 aa)
SLF2SMC5-SMC6 complex localization factor 2. (1167 aa)
A0A4W2BZY5Reverse transcriptase domain-containing protein. (738 aa)
A0A4W2BZA0Fork-head domain-containing protein. (697 aa)
KMT5BLysine methyltransferase 5B. (911 aa)
PPP4CSerine/threonine-protein phosphatase. (307 aa)
WRNIP1WRN helicase interacting protein 1. (638 aa)
KLHL15Kelch like family member 15. (602 aa)
DEKDEK proto-oncogene. (375 aa)
FUSFUS RNA binding protein. (512 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (513 aa)
TFPTTCF3 fusion partner. (251 aa)
TIGARTP53 induced glycolysis regulatory phosphatase. (270 aa)
PARPBPPARP1 binding protein. (580 aa)
RMI2RecQ mediated genome instability 2. (157 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (397 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
RNF8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (504 aa)
HELBDNA helicase B. (1136 aa)
AUNIPAurora kinase A and ninein interacting protein. (357 aa)
UCHL5Ubiquitin carboxyl-terminal hydrolase. (328 aa)
BABAM2BRISC and BRCA1 A complex member 2. (383 aa)
TRIM28Tripartite motif containing 28. (838 aa)
BCL7CBAF chromatin remodeling complex subunit BCL7C. (244 aa)
ARID2AT-rich interaction domain 2. (1834 aa)
WDR48WD repeat domain 48. (677 aa)
POT1Protection of telomeres 1. (785 aa)
MCRS1Microspherule protein 1. (462 aa)
OTUB2OTU deubiquitinase, ubiquitin aldehyde binding 2. (253 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1266 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (494 aa)
TIMELESSTimeless circadian regulator. (1213 aa)
NPAS2Neuronal PAS domain protein 2. (849 aa)
SPIRE2Spire type actin nucleation factor 2. (763 aa)
TMEM161ATransmembrane protein 161A. (478 aa)
MBTD1Mbt domain containing 1. (692 aa)
NUDT16L1Nudix hydrolase 16 like 1. (211 aa)
EYA3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (573 aa)
NFRKBNuclear factor related to kappaB binding protein. (1291 aa)
CCDC117Coiled-coil domain containing 117. (278 aa)
EPC2Enhancer of polycomb homolog. (832 aa)
UBQLN4Ubiquilin 4. (734 aa)
A0A4W2EZ53MRG domain-containing protein. (258 aa)
RIF1Replication timing regulatory factor 1. (2465 aa)
A0A4W2EYF1Reverse transcriptase domain-containing protein. (738 aa)
BABAM1BRISC and BRCA1 A complex member 1. (332 aa)
BRD8Bromodomain containing 8. (1235 aa)
POGZPogo transposable element derived with ZNF domain. (1551 aa)
PPP4R2Protein phosphatase 4 regulatory subunit 2. (412 aa)
FIGNL1Fidgetin like 1; Belongs to the AAA ATPase family. (677 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (421 aa)
HELQHelicase, POLQ like. (1092 aa)
UIMC1Ubiquitin interaction motif containing 1. (753 aa)
A0A4W2ERQ5Reverse transcriptase domain-containing protein. (1152 aa)
HDGFL2HDGF like 2. (673 aa)
DTX3LDeltex E3 ubiquitin ligase 3L. (739 aa)
POLQDNA polymerase theta. (2585 aa)
A0A4W2EMP6Uncharacterized protein. (232 aa)
EYA4Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (645 aa)
PNKPPolynucleotide kinase 3'-phosphatase. (550 aa)
BCL7ABAF chromatin remodeling complex subunit BCL7A. (231 aa)
SIRT7Sirtuin 7. (420 aa)
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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