18 items (Bos indicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NFYA	Nuclear transcription factor Y subunit alpha. (347 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (3710 aa)
	OGT	O-linked N-acetylglucosamine (GlcNAc) transferase. (1036 aa)
	SETD1B	SET domain containing 1B, histone lysine methyltransferase. (1966 aa)
	BEND3	BEN domain containing 3. (1005 aa)
	TET3	Tet methylcytosine dioxygenase 3. (1792 aa)
	A0A4W2CWQ4	WD_REPEATS_REGION domain-containing protein. (191 aa)
	RTF1	RTF1 homolog, Paf1/RNA polymerase II complex component. (714 aa)
	ARID4A	AT-rich interaction domain 4A. (1261 aa)
	NFYC	Nuclear transcription factor Y subunit gamma. (439 aa)
	KMT2D	Lysine methyltransferase 2D. (5579 aa)
	TET2	Tet methylcytosine dioxygenase 2. (2007 aa)
	WDR82	WD repeat domain 82. (313 aa)
	CTR9	CTR9 homolog, Paf1/RNA polymerase II complex component. (1173 aa)
	ZNF335	Zinc finger protein 335. (1342 aa)
	WDR61	WD_REPEATS_REGION domain-containing protein. (323 aa)
	HIST1H1C	Histone cluster 1 H1 family member c. (227 aa)
	SETD1A	SET domain containing 1A, histone lysine methyltransferase. (1708 aa)

Your Current Organism:

Bos indicus

NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A4W2CWQ4	CTR9	A0A4W2CWQ4	A0A4W2G045	WD_REPEATS_REGION domain-containing protein.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.982
A0A4W2CWQ4	RTF1	A0A4W2CWQ4	A0A4W2CZ85	WD_REPEATS_REGION domain-containing protein.	RTF1 homolog, Paf1/RNA polymerase II complex component.	0.760
A0A4W2CWQ4	WDR82	A0A4W2CWQ4	A0A4W2FBD2	WD_REPEATS_REGION domain-containing protein.	WD repeat domain 82.	0.489
ARID4A	SETD1A	A0A4W2D5X4	A0A4W2IIB7	AT-rich interaction domain 4A.	SET domain containing 1A, histone lysine methyltransferase.	0.438
ARID4A	SETD1B	A0A4W2D5X4	A0A4W2CD22	AT-rich interaction domain 4A.	SET domain containing 1B, histone lysine methyltransferase.	0.438
CTR9	A0A4W2CWQ4	A0A4W2G045	A0A4W2CWQ4	CTR9 homolog, Paf1/RNA polymerase II complex component.	WD_REPEATS_REGION domain-containing protein.	0.982
CTR9	RTF1	A0A4W2G045	A0A4W2CZ85	CTR9 homolog, Paf1/RNA polymerase II complex component.	RTF1 homolog, Paf1/RNA polymerase II complex component.	0.999
CTR9	WDR61	A0A4W2G045	A0A4W2HIK3	CTR9 homolog, Paf1/RNA polymerase II complex component.	WD_REPEATS_REGION domain-containing protein.	0.982
CTR9	WDR82	A0A4W2G045	A0A4W2FBD2	CTR9 homolog, Paf1/RNA polymerase II complex component.	WD repeat domain 82.	0.599
KMT2A	KMT2D	A0A4W2BUF8	A0A4W2EMQ1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Lysine methyltransferase 2D.	0.956
KMT2A	SETD1A	A0A4W2BUF8	A0A4W2IIB7	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	SET domain containing 1A, histone lysine methyltransferase.	0.637
KMT2A	SETD1B	A0A4W2BUF8	A0A4W2CD22	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	SET domain containing 1B, histone lysine methyltransferase.	0.757
KMT2A	TET2	A0A4W2BUF8	A0A4W2F2I2	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Tet methylcytosine dioxygenase 2.	0.839
KMT2D	KMT2A	A0A4W2EMQ1	A0A4W2BUF8	Lysine methyltransferase 2D.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.956
KMT2D	SETD1A	A0A4W2EMQ1	A0A4W2IIB7	Lysine methyltransferase 2D.	SET domain containing 1A, histone lysine methyltransferase.	0.619
KMT2D	SETD1B	A0A4W2EMQ1	A0A4W2CD22	Lysine methyltransferase 2D.	SET domain containing 1B, histone lysine methyltransferase.	0.926
NFYA	NFYC	A0A4W2FFM5	A0A4W2DU53	Nuclear transcription factor Y subunit alpha.	Nuclear transcription factor Y subunit gamma.	0.999
NFYC	NFYA	A0A4W2DU53	A0A4W2FFM5	Nuclear transcription factor Y subunit gamma.	Nuclear transcription factor Y subunit alpha.	0.999
OGT	TET2	A0A4W2C0H8	A0A4W2F2I2	O-linked N-acetylglucosamine (GlcNAc) transferase.	Tet methylcytosine dioxygenase 2.	0.788
OGT	TET3	A0A4W2C0H8	A0A4W2CQV5	O-linked N-acetylglucosamine (GlcNAc) transferase.	Tet methylcytosine dioxygenase 3.	0.713

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