(5 nodes) scaRNA localization to Cajal body network (Balaenoptera acutorostrata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WRAP53	Telomerase Cajal body protein 1 isoform X1. (543 aa)
	DKC1	H/ACA ribonucleoprotein complex subunit DKC1. (515 aa)
	TCP1	T-complex protein 1 subunit alpha isoform X1. (556 aa)
	CCT4	T-complex protein 1 subunit delta. (539 aa)
	CCT2	T-complex protein 1 subunit beta. (535 aa)

Your Current Organism:

Balaenoptera acutorostrata

NCBI taxonomy Id: 310752
Other names: B. acutorostrata scammoni, Balaenoptera acutorostrata scammoni

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT2	CCT4	A0A384B5V1	A0A384AQW9	T-complex protein 1 subunit beta.	T-complex protein 1 subunit delta.	0.999
CCT2	TCP1	A0A384B5V1	A0A384AFQ9	T-complex protein 1 subunit beta.	T-complex protein 1 subunit alpha isoform X1.	0.999
CCT4	CCT2	A0A384AQW9	A0A384B5V1	T-complex protein 1 subunit delta.	T-complex protein 1 subunit beta.	0.999
CCT4	TCP1	A0A384AQW9	A0A384AFQ9	T-complex protein 1 subunit delta.	T-complex protein 1 subunit alpha isoform X1.	0.999
DKC1	WRAP53	A0A384ABL4	A0A383YUT9	H/ACA ribonucleoprotein complex subunit DKC1.	Telomerase Cajal body protein 1 isoform X1.	0.988
TCP1	CCT2	A0A384AFQ9	A0A384B5V1	T-complex protein 1 subunit alpha isoform X1.	T-complex protein 1 subunit beta.	0.999
TCP1	CCT4	A0A384AFQ9	A0A384AQW9	T-complex protein 1 subunit alpha isoform X1.	T-complex protein 1 subunit delta.	0.999
TCP1	WRAP53	A0A384AFQ9	A0A383YUT9	T-complex protein 1 subunit alpha isoform X1.	Telomerase Cajal body protein 1 isoform X1.	0.428
WRAP53	DKC1	A0A383YUT9	A0A384ABL4	Telomerase Cajal body protein 1 isoform X1.	H/ACA ribonucleoprotein complex subunit DKC1.	0.988
WRAP53	TCP1	A0A383YUT9	A0A384AFQ9	Telomerase Cajal body protein 1 isoform X1.	T-complex protein 1 subunit alpha isoform X1.	0.428