STRINGSTRING
gpsA gpsA Geob_0079 Geob_0079 mtd mtd bamQ bamQ Geob_0099 Geob_0099 Geob_0157 Geob_0157 Geob_0162 Geob_0162 Geob_0170 Geob_0170 Geob_0221 Geob_0221 maeB-2 maeB-2 Geob_0244 Geob_0244 Geob_0263 Geob_0263 Geob_0268 Geob_0268 ldh ldh pdxA pdxA Geob_0663 Geob_0663 hisD hisD murB murB Geob_0936 Geob_0936 hprA hprA Geob_1164 Geob_1164 Geob_1457 Geob_1457 ilvC ilvC dxr dxr rmlD rmlD fcl fcl Geob_2135 Geob_2135 Geob_2516 Geob_2516 fabG-2 fabG-2 icd icd mdh mdh ribD ribD hom hom maeB-1 maeB-1 ugd ugd Geob_2995 Geob_2995 Geob_3227 Geob_3227 Geob_3242 Geob_3242 aroE aroE serA serA leuB leuB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
gpsASn-glycerol-3-phosphate 2-dehydrogenase, NAD(P)-dependent; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (337 aa)
Geob_0079Oxidoreductase, aldo/keto reductase family. (336 aa)
mtdMannitol dehydrogenase. (353 aa)
bamQ6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. (357 aa)
Geob_0099Oxidoreductase, SDR family; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
Geob_0157Branched-chain 2-oxoacid (Si)-reductase, 2-oxopantoate 2-reductase family; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (310 aa)
Geob_01623-hydroxyacyl-CoA dehydrogenase. (289 aa)
Geob_01703-hydroxyacyl-CoA dehydrogenase. (289 aa)
Geob_02213-hydroxyacyl-CoA dehydrogenase. (311 aa)
maeB-2Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (755 aa)
Geob_02443-hydroxyacyl-CoA dehydrogenase. (281 aa)
Geob_0263Iron-containing alcohol dehydrogenase. (387 aa)
Geob_0268Ethanol dehydrogenase, putative. (387 aa)
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (313 aa)
pdxA4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). (338 aa)
Geob_0663NDP-hexose 4-oxoreductase, putative; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (291 aa)
hisDHistidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (429 aa)
murBUDP-N-acetylenolpyruvylglucosamine (Si)-reductase; Cell wall formation. (303 aa)
Geob_0936D-isomer-specific 2-hydroxyacid dehydrogenase, NAD-dependent. (318 aa)
hprAHydroxypyruvate (Si)-reductase, NAD(P)H-dependent, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (328 aa)
Geob_1164NADPH-dependent aldehyde reductase. (384 aa)
Geob_1457dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (294 aa)
ilvC(S)-2-acetolactate/(S)-2-aceto-2- hydroxybutanoate isomeroreductase, class I; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (336 aa)
dxr1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (384 aa)
rmlDdTDP-6-deoxy-beta-L-lyxo-hexopyranos-4-ulose 4-(Si)-reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (276 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (323 aa)
Geob_2135dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (281 aa)
Geob_2516Alcohol dehydrogenase, zinc-containing. (341 aa)
fabG-23-oxoacyl-(acyl carrier protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
icdIsocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family. (743 aa)
mdhMalate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (318 aa)
ribDDiaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (368 aa)
homHomoserine dehydrogenase. (436 aa)
maeB-1Malate oxidoreductase, NADP-dependent, phosphate acetyltransferase-like domain-containing. (750 aa)
ugdUDP-glucose 6-dehydrogenase. (450 aa)
Geob_2995Branched-chain 2-oxoacid (Si)-reductase, 2-oxopantoate 2-reductase family; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (304 aa)
Geob_3227NDP-N-acetyl-D-galactosamine 6-dehydrogenase, putative; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (416 aa)
Geob_3242Zinc-dependent alcohol dehydrogenase. (321 aa)
aroEShikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (290 aa)
serAD-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (540 aa)
leuB3-isopropylmalate/3-methylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (362 aa)
Your Current Organism:
Geobacter daltonii
NCBI taxonomy Id: 316067
Other names: G. daltonii FRC-32, Geobacter daltonii FRC-32, Geobacter daltonii str. FRC-32, Geobacter daltonii strain FRC-32, Geobacter sp. FRC-32
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