STRINGSTRING
Pden_2113 Pden_2113 Pden_2626 Pden_2626 Pden_2627 Pden_2627 Pden_2628 Pden_2628 fliP fliP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pden_2113PFAM: export protein FliQ, family 3; KEGG: rsp:RSP_1328 flagellar biosynthetic protein FliQ. (88 aa)
Pden_2626PFAM: type III secretion exporter; KEGG: sil:SPO0172 flagellar biosynthetic protein FlhB. (368 aa)
Pden_2627KEGG: sil:SPO0171 flagellar biosynthetic protein FliR. (252 aa)
Pden_2628PFAM: type III secretion FHIPEP protein; KEGG: sil:SPO0170 flagellar biosynthesis protein FlhA. (694 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (241 aa)
Your Current Organism:
Paracoccus denitrificans
NCBI taxonomy Id: 318586
Other names: P. denitrificans PD1222, Paracoccus denitrificans PD1222
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