STRINGSTRING
SDL10175.1 SDL10175.1 SDL06275.1 SDL06275.1 SDL06354.1 SDL06354.1 SDL19880.1 SDL19880.1 SDL20080.1 SDL20080.1 SDL17988.1 SDL17988.1 SDL31693.1 SDL31693.1 SDL30380.1 SDL30380.1 SDL42486.1 SDL42486.1 SDL52196.1 SDL52196.1 SDL52649.1 SDL52649.1 trmFO trmFO SDL61936.1 SDL61936.1 SDL61974.1 SDL61974.1 SDL62318.1 SDL62318.1 SDL71816.1 SDL71816.1 SDL72021.1 SDL72021.1 SDL79615.1 SDL79615.1 SDL80598.1 SDL80598.1 SDL81044.1 SDL81044.1 SDL85213.1 SDL85213.1 SDL99561.1 SDL99561.1 SDM02644.1 SDM02644.1 mnmG mnmG SDM16245.1 SDM16245.1 mnmG-2 mnmG-2 SDM27888.1 SDM27888.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDL10175.1Pyrrolysine biosynthesis protein PylC. (418 aa)
SDL06275.1Sarcosine oxidase subunit beta. (382 aa)
SDL06354.1Sarcosine oxidase subunit alpha. (383 aa)
SDL19880.1Heterodisulfide reductase subunit A. (1028 aa)
SDL20080.1Heterodisulfide reductase subunit A. (347 aa)
SDL17988.1NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. (449 aa)
SDL31693.1FAD dependent oxidoreductase. (637 aa)
SDL30380.1NADH-quinone oxidoreductase subunit F. (1025 aa)
SDL42486.1Nitrite reductase (NADH) large subunit. (377 aa)
SDL52196.1Alkyl hydroperoxide reductase subunit F. (399 aa)
SDL52649.1Dihydrolipoamide dehydrogenase. (443 aa)
trmFOmethylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. (437 aa)
SDL61936.1Glycerol-3-phosphate dehydrogenase. (508 aa)
SDL61974.1Thioredoxin reductase. (426 aa)
SDL62318.1Hypothetical protein. (409 aa)
SDL71816.1Heterodisulfide reductase subunit A. (661 aa)
SDL72021.1Succinate dehydrogenase / fumarate reductase flavoprotein subunit. (534 aa)
SDL79615.1Thiol-driven fumarate reductase, flavoprotein subunit. (587 aa)
SDL80598.1Thioredoxin reductase (NADPH). (403 aa)
SDL81044.1Pyridine nucleotide-disulphide oxidoreductase. (408 aa)
SDL85213.1Hypothetical protein. (466 aa)
SDL99561.1NADPH-dependent glutamate synthase beta chain. (681 aa)
SDM02644.1Dihydrolipoamide dehydrogenase. (459 aa)
mnmGtRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (643 aa)
SDM16245.1Thioredoxin reductase (NADPH). (313 aa)
mnmG-2tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (628 aa)
SDM27888.1Geranylgeranyl reductase family. (400 aa)
Your Current Organism:
Halarsenatibacter silvermanii
NCBI taxonomy Id: 321763
Other names: DSM 21684, H. silvermanii, Halanaerobiaceae bacterium SLAS-1, Halarsenatibacter silvermanii Switzer Blum et al. 2010, strain SLAS-1
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