Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Noc_0078 | uvrA | Noc_0078 | Noc_3021 | UvrA family protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.907 |
| Noc_0115 | Noc_1779 | Noc_0115 | Noc_1779 | ABC transporter, transmembrane region. | ABC transporter, ATPase subunit. | 0.601 |
| Noc_0115 | Noc_2786 | Noc_0115 | Noc_2786 | ABC transporter, transmembrane region. | ABC transporter, ATPase subunit. | 0.526 |
| Noc_0115 | Noc_2832 | Noc_0115 | Noc_2832 | ABC transporter, transmembrane region. | ABC transporter, ATPase subunit. | 0.771 |
| Noc_0115 | pstB1 | Noc_0115 | Noc_0581 | ABC transporter, transmembrane region. | Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.904 |
| Noc_0279 | Noc_1818 | Noc_0279 | Noc_1818 | Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily. | Type I secretion system ATPase, PrtD. | 0.885 |
| Noc_0428 | Noc_2950 | Noc_0428 | Noc_2950 | ABC transporter, ATPase subunit. | ABC efflux pump, fused ATPase and inner membrane subunits. | 0.586 |
| Noc_0839 | Noc_1273 | Noc_0839 | Noc_1273 | ABC transporter, ATPase subunit. | ABC transporter, ATPase subunit. | 0.497 |
| Noc_0839 | lolD | Noc_0839 | Noc_2670 | ABC transporter, ATPase subunit. | Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.527 |
| Noc_0936 | Noc_2773 | Noc_0936 | Noc_2773 | Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. | ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. | 0.904 |
| Noc_1273 | Noc_0839 | Noc_1273 | Noc_0839 | ABC transporter, ATPase subunit. | ABC transporter, ATPase subunit. | 0.497 |
| Noc_1273 | Noc_2422 | Noc_1273 | Noc_2422 | ABC transporter, ATPase subunit. | ABC transporter, ATPase subunit. | 0.404 |
| Noc_1273 | Noc_2792 | Noc_1273 | Noc_2792 | ABC transporter, ATPase subunit. | ABC transporter, ATPase subunit. | 0.589 |
| Noc_1273 | Noc_2950 | Noc_1273 | Noc_2950 | ABC transporter, ATPase subunit. | ABC efflux pump, fused ATPase and inner membrane subunits. | 0.834 |
| Noc_1273 | msbA | Noc_1273 | Noc_2675 | ABC transporter, ATPase subunit. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.615 |
| Noc_1273 | pstB2 | Noc_1273 | Noc_2396 | ABC transporter, ATPase subunit. | Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.521 |
| Noc_1779 | Noc_0115 | Noc_1779 | Noc_0115 | ABC transporter, ATPase subunit. | ABC transporter, transmembrane region. | 0.601 |
| Noc_1779 | Noc_2950 | Noc_1779 | Noc_2950 | ABC transporter, ATPase subunit. | ABC efflux pump, fused ATPase and inner membrane subunits. | 0.601 |
| Noc_1779 | msbA | Noc_1779 | Noc_2675 | ABC transporter, ATPase subunit. | Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.601 |
| Noc_1818 | Noc_0279 | Noc_1818 | Noc_0279 | Type I secretion system ATPase, PrtD. | Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily. | 0.885 |
page 1 of 3